Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 FGFR3P6-201ENST00000457012 610 ntBASIC15.79■□□□□ 0.12
UBL4AP11441 SCARNA2-201ENST00000458748 420 ntBASIC15.79■□□□□ 0.12
UBL4AP11441 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBL4AP11441 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.79■□□□□ 0.12
UBL4AP11441 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.79■□□□□ 0.12
UBL4AP11441 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
UBL4AP11441 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBL4AP11441 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
UBL4AP11441 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBL4AP11441 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBL4AP11441 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.79■□□□□ 0.12
UBL4AP11441 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBL4AP11441 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.79■□□□□ 0.12
UBL4AP11441 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBL4AP11441 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.79■□□□□ 0.12
UBL4AP11441 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
UBL4AP11441 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.79■□□□□ 0.12
UBL4AP11441 AL121761.2-201ENST00000598007 1648 ntBASIC15.79■□□□□ 0.12
UBL4AP11441 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.79■□□□□ 0.12
UBL4AP11441 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
UBL4AP11441 GPR89P-201ENST00000407924 1495 ntBASIC15.78■□□□□ 0.12
UBL4AP11441 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBL4AP11441 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UBL4AP11441 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBL4AP11441 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UBL4AP11441 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.78■□□□□ 0.12
UBL4AP11441 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBL4AP11441 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
UBL4AP11441 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBL4AP11441 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBL4AP11441 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.78■□□□□ 0.12
UBL4AP11441 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBL4AP11441 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UBL4AP11441 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UBL4AP11441 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
UBL4AP11441 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UBL4AP11441 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
UBL4AP11441 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
UBL4AP11441 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
UBL4AP11441 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.78■□□□□ 0.12
UBL4AP11441 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.78■□□□□ 0.12
UBL4AP11441 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBL4AP11441 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
UBL4AP11441 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.78■□□□□ 0.12
UBL4AP11441 AC060834.1-201ENST00000443027 2032 ntBASIC15.78■□□□□ 0.12
UBL4AP11441 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBL4AP11441 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBL4AP11441 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UBL4AP11441 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
UBL4AP11441 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.78■□□□□ 0.12
UBL4AP11441 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.78■□□□□ 0.12
UBL4AP11441 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBL4AP11441 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
UBL4AP11441 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBL4AP11441 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBL4AP11441 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UBL4AP11441 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBL4AP11441 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBL4AP11441 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.77■□□□□ 0.12
UBL4AP11441 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBL4AP11441 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBL4AP11441 NCF1C-201ENST00000438382 1427 ntBASIC15.77■□□□□ 0.12
UBL4AP11441 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBL4AP11441 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
UBL4AP11441 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.77■□□□□ 0.12
UBL4AP11441 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
UBL4AP11441 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBL4AP11441 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBL4AP11441 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBL4AP11441 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
UBL4AP11441 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
UBL4AP11441 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBL4AP11441 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.77■□□□□ 0.12
UBL4AP11441 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBL4AP11441 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBL4AP11441 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBL4AP11441 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBL4AP11441 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
UBL4AP11441 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.77■□□□□ 0.12
UBL4AP11441 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.77■□□□□ 0.12
UBL4AP11441 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.77■□□□□ 0.12
UBL4AP11441 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.77■□□□□ 0.12
UBL4AP11441 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.77■□□□□ 0.12
UBL4AP11441 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.12
UBL4AP11441 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.77■□□□□ 0.12
UBL4AP11441 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.77■□□□□ 0.12
UBL4AP11441 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.77■□□□□ 0.11
UBL4AP11441 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.77■□□□□ 0.11
UBL4AP11441 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
UBL4AP11441 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
UBL4AP11441 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
UBL4AP11441 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
UBL4AP11441 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.77■□□□□ 0.11
UBL4AP11441 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
UBL4AP11441 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
UBL4AP11441 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.77■□□□□ 0.11
UBL4AP11441 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
UBL4AP11441 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
UBL4AP11441 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBL4AP11441 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms