Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 KRT18P3-201ENST00000451602 1288 ntBASIC18.61■□□□□ 0.57
CLTAP09496 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.61■□□□□ 0.57
CLTAP09496 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.61■□□□□ 0.57
CLTAP09496 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.61■□□□□ 0.57
CLTAP09496 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.61■□□□□ 0.57
CLTAP09496 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
CLTAP09496 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.61■□□□□ 0.57
CLTAP09496 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLTAP09496 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLTAP09496 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLTAP09496 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.61■□□□□ 0.57
CLTAP09496 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.61■□□□□ 0.57
CLTAP09496 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLTAP09496 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLTAP09496 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLTAP09496 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLTAP09496 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLTAP09496 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CLTAP09496 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.6■□□□□ 0.57
CLTAP09496 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.6■□□□□ 0.57
CLTAP09496 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.6■□□□□ 0.57
CLTAP09496 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.6■□□□□ 0.57
CLTAP09496 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLTAP09496 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLTAP09496 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLTAP09496 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CLTAP09496 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLTAP09496 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.6■□□□□ 0.57
CLTAP09496 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLTAP09496 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLTAP09496 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.6■□□□□ 0.57
CLTAP09496 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.6■□□□□ 0.57
CLTAP09496 AC007967.2-201ENST00000432613 625 ntBASIC18.6■□□□□ 0.57
CLTAP09496 OR7E47P-204ENST00000575924 449 ntBASIC18.6■□□□□ 0.57
CLTAP09496 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLTAP09496 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLTAP09496 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLTAP09496 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.6■□□□□ 0.57
CLTAP09496 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLTAP09496 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.6■□□□□ 0.57
CLTAP09496 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLTAP09496 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLTAP09496 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLTAP09496 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLTAP09496 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLTAP09496 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CLTAP09496 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.6■□□□□ 0.57
CLTAP09496 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CLTAP09496 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
CLTAP09496 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLTAP09496 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.59■□□□□ 0.57
CLTAP09496 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CLTAP09496 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLTAP09496 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLTAP09496 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLTAP09496 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLTAP09496 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.59■□□□□ 0.57
CLTAP09496 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLTAP09496 PMS2P7-201ENST00000506558 1336 ntBASIC18.59■□□□□ 0.57
CLTAP09496 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLTAP09496 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
CLTAP09496 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLTAP09496 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.59■□□□□ 0.57
CLTAP09496 HCG4B-203ENST00000450128 991 ntBASIC18.59■□□□□ 0.57
CLTAP09496 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.59■□□□□ 0.57
CLTAP09496 RNA5SP416-201ENST00000516838 111 ntBASIC18.59■□□□□ 0.57
CLTAP09496 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.59■□□□□ 0.57
CLTAP09496 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLTAP09496 AC064836.3-201ENST00000607928 673 ntBASIC18.59■□□□□ 0.57
CLTAP09496 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLTAP09496 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLTAP09496 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLTAP09496 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.59■□□□□ 0.57
CLTAP09496 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CLTAP09496 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CLTAP09496 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLTAP09496 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLTAP09496 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
CLTAP09496 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLTAP09496 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLTAP09496 AC011270.2-201ENST00000624293 2550 ntBASIC18.58■□□□□ 0.57
CLTAP09496 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLTAP09496 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.58■□□□□ 0.57
CLTAP09496 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CLTAP09496 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.58■□□□□ 0.57
CLTAP09496 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CLTAP09496 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLTAP09496 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLTAP09496 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLTAP09496 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CLTAP09496 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CLTAP09496 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
CLTAP09496 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CLTAP09496 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.58■□□□□ 0.56
CLTAP09496 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
CLTAP09496 AC087163.2-201ENST00000457299 853 ntBASIC18.58■□□□□ 0.56
CLTAP09496 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.58■□□□□ 0.56
CLTAP09496 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.58■□□□□ 0.56
CLTAP09496 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.58■□□□□ 0.56
CLTAP09496 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms