Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.1■□□□□ 0.17
MT-ND1P03886 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND1P03886 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND1P03886 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.1■□□□□ 0.17
MT-ND1P03886 AC109462.3-201ENST00000573934 613 ntBASIC16.1■□□□□ 0.17
MT-ND1P03886 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.1■□□□□ 0.17
MT-ND1P03886 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.1■□□□□ 0.17
MT-ND1P03886 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.1■□□□□ 0.17
MT-ND1P03886 AC019129.2-201ENST00000609837 1235 ntBASIC16.1■□□□□ 0.17
MT-ND1P03886 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
MT-ND1P03886 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
MT-ND1P03886 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND1P03886 AC022188.1-201ENST00000620960 1664 ntBASIC16.1■□□□□ 0.17
MT-ND1P03886 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND1P03886 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND1P03886 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND1P03886 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND1P03886 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND1P03886 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND1P03886 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND1P03886 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND1P03886 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND1P03886 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.1■□□□□ 0.17
MT-ND1P03886 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND1P03886 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND1P03886 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND1P03886 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND1P03886 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.1■□□□□ 0.17
MT-ND1P03886 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND1P03886 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND1P03886 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND1P03886 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
MT-ND1P03886 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
MT-ND1P03886 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MT-ND1P03886 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND1P03886 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
MT-ND1P03886 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
MT-ND1P03886 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND1P03886 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND1P03886 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND1P03886 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND1P03886 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
MT-ND1P03886 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.09■□□□□ 0.17
MT-ND1P03886 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND1P03886 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND1P03886 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND1P03886 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND1P03886 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND1P03886 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.09■□□□□ 0.17
MT-ND1P03886 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND1P03886 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.09■□□□□ 0.17
MT-ND1P03886 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND1P03886 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND1P03886 AK4P3-201ENST00000418260 669 ntBASIC16.09■□□□□ 0.17
MT-ND1P03886 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.09■□□□□ 0.17
MT-ND1P03886 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
MT-ND1P03886 KRT18P57-201ENST00000443599 1254 ntBASIC16.09■□□□□ 0.17
MT-ND1P03886 AC112907.2-201ENST00000448639 330 ntBASIC16.09■□□□□ 0.17
MT-ND1P03886 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.09■□□□□ 0.17
MT-ND1P03886 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.09■□□□□ 0.17
MT-ND1P03886 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.09■□□□□ 0.17
MT-ND1P03886 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
MT-ND1P03886 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.09■□□□□ 0.17
MT-ND1P03886 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
MT-ND1P03886 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.09■□□□□ 0.17
MT-ND1P03886 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.09■□□□□ 0.17
MT-ND1P03886 AC006011.2-201ENST00000621313 1158 ntBASIC16.09■□□□□ 0.17
MT-ND1P03886 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.09■□□□□ 0.17
MT-ND1P03886 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND1P03886 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND1P03886 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.09■□□□□ 0.17
MT-ND1P03886 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.09■□□□□ 0.17
MT-ND1P03886 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
MT-ND1P03886 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND1P03886 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.09■□□□□ 0.17
MT-ND1P03886 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND1P03886 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND1P03886 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.09■□□□□ 0.17
MT-ND1P03886 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
MT-ND1P03886 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND1P03886 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
MT-ND1P03886 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
MT-ND1P03886 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.08■□□□□ 0.17
MT-ND1P03886 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
MT-ND1P03886 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.17
MT-ND1P03886 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
MT-ND1P03886 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
MT-ND1P03886 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MT-ND1P03886 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.08■□□□□ 0.16
MT-ND1P03886 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MT-ND1P03886 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MT-ND1P03886 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
MT-ND1P03886 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MT-ND1P03886 COX5BP2-201ENST00000392354 334 ntBASIC16.08■□□□□ 0.16
MT-ND1P03886 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.08■□□□□ 0.16
MT-ND1P03886 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.08■□□□□ 0.16
MT-ND1P03886 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MT-ND1P03886 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.08■□□□□ 0.16
MT-ND1P03886 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
MT-ND1P03886 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms