Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT6AP02538 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT6AP02538 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT6AP02538 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT6AP02538 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
KRT6AP02538 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT6AP02538 AC078925.2-201ENST00000624013 1973 ntBASIC16.53■□□□□ 0.24
KRT6AP02538 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
KRT6AP02538 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
KRT6AP02538 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.53■□□□□ 0.24
KRT6AP02538 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
KRT6AP02538 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
KRT6AP02538 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KRT6AP02538 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT6AP02538 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.52■□□□□ 0.24
KRT6AP02538 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
KRT6AP02538 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT6AP02538 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT6AP02538 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
KRT6AP02538 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
KRT6AP02538 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
KRT6AP02538 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.52■□□□□ 0.24
KRT6AP02538 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.52■□□□□ 0.24
KRT6AP02538 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.52■□□□□ 0.24
KRT6AP02538 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.52■□□□□ 0.24
KRT6AP02538 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.52■□□□□ 0.24
KRT6AP02538 KRT16P4-201ENST00000453883 522 ntBASIC16.52■□□□□ 0.24
KRT6AP02538 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.52■□□□□ 0.24
KRT6AP02538 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.52■□□□□ 0.24
KRT6AP02538 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT6AP02538 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.52■□□□□ 0.24
KRT6AP02538 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC16.52■□□□□ 0.24
KRT6AP02538 AC073592.4-201ENST00000623827 446 ntBASIC16.52■□□□□ 0.24
KRT6AP02538 AC008894.3-201ENST00000624324 3103 ntBASIC16.52■□□□□ 0.24
KRT6AP02538 RNF216P1-203ENST00000404404 2427 ntBASIC16.52■□□□□ 0.24
KRT6AP02538 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT6AP02538 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
KRT6AP02538 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT6AP02538 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT6AP02538 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT6AP02538 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT6AP02538 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
KRT6AP02538 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
KRT6AP02538 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
KRT6AP02538 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
KRT6AP02538 AC079776.2-201ENST00000641154 1609 ntBASIC16.52■□□□□ 0.23
KRT6AP02538 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
KRT6AP02538 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT6AP02538 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT6AP02538 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT6AP02538 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT6AP02538 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT6AP02538 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT6AP02538 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT6AP02538 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT6AP02538 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT6AP02538 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT6AP02538 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT6AP02538 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT6AP02538 ARMC10P1-201ENST00000313754 855 ntBASIC16.51■□□□□ 0.23
KRT6AP02538 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
KRT6AP02538 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT6AP02538 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
KRT6AP02538 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.51■□□□□ 0.23
KRT6AP02538 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.51■□□□□ 0.23
KRT6AP02538 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.51■□□□□ 0.23
KRT6AP02538 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.51■□□□□ 0.23
KRT6AP02538 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
KRT6AP02538 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT6AP02538 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT6AP02538 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.51■□□□□ 0.23
KRT6AP02538 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
KRT6AP02538 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT6AP02538 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
KRT6AP02538 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
KRT6AP02538 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
KRT6AP02538 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT6AP02538 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT6AP02538 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT6AP02538 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
KRT6AP02538 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
KRT6AP02538 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT6AP02538 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.5■□□□□ 0.23
KRT6AP02538 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT6AP02538 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
KRT6AP02538 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT6AP02538 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.5■□□□□ 0.23
KRT6AP02538 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT6AP02538 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT6AP02538 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT6AP02538 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.5■□□□□ 0.23
KRT6AP02538 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT6AP02538 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT6AP02538 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT6AP02538 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.5■□□□□ 0.23
KRT6AP02538 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT6AP02538 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.5■□□□□ 0.23
KRT6AP02538 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KRT6AP02538 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KRT6AP02538 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms