Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV12-3P01733 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TRBV12-3P01733 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.15□□□□□ -0.3
TRBV12-3P01733 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC13.15□□□□□ -0.3
TRBV12-3P01733 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV12-3P01733 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC13.15□□□□□ -0.3
TRBV12-3P01733 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV12-3P01733 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV12-3P01733 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
TRBV12-3P01733 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.15□□□□□ -0.31
TRBV12-3P01733 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
TRBV12-3P01733 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
TRBV12-3P01733 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
TRBV12-3P01733 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV12-3P01733 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.14□□□□□ -0.31
TRBV12-3P01733 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV12-3P01733 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV12-3P01733 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV12-3P01733 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV12-3P01733 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV12-3P01733 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.14□□□□□ -0.31
TRBV12-3P01733 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.14□□□□□ -0.31
TRBV12-3P01733 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV12-3P01733 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
TRBV12-3P01733 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TRBV12-3P01733 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV12-3P01733 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV12-3P01733 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV12-3P01733 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.14□□□□□ -0.31
TRBV12-3P01733 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV12-3P01733 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
TRBV12-3P01733 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
TRBV12-3P01733 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.14□□□□□ -0.31
TRBV12-3P01733 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.14□□□□□ -0.31
TRBV12-3P01733 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.14□□□□□ -0.31
TRBV12-3P01733 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.14□□□□□ -0.31
TRBV12-3P01733 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.14□□□□□ -0.31
TRBV12-3P01733 OR7E47P-204ENST00000575924 449 ntBASIC13.14□□□□□ -0.31
TRBV12-3P01733 Z83851.2-201ENST00000609564 659 ntBASIC13.14□□□□□ -0.31
TRBV12-3P01733 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV12-3P01733 AF228730.7-201ENST00000641842 219 ntBASIC13.14□□□□□ -0.31
TRBV12-3P01733 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.14□□□□□ -0.31
TRBV12-3P01733 AC002310.6-201ENST00000624451 1377 ntBASIC13.14□□□□□ -0.31
TRBV12-3P01733 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
TRBV12-3P01733 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV12-3P01733 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV12-3P01733 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV12-3P01733 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV12-3P01733 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.14□□□□□ -0.31
TRBV12-3P01733 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.14□□□□□ -0.31
TRBV12-3P01733 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV12-3P01733 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV12-3P01733 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV12-3P01733 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV12-3P01733 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
TRBV12-3P01733 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC13.14□□□□□ -0.31
TRBV12-3P01733 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
TRBV12-3P01733 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV12-3P01733 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
TRBV12-3P01733 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.13□□□□□ -0.31
TRBV12-3P01733 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV12-3P01733 OR6D1P-203ENST00000641209 4860 ntBASIC13.13□□□□□ -0.31
TRBV12-3P01733 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV12-3P01733 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV12-3P01733 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
TRBV12-3P01733 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV12-3P01733 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV12-3P01733 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV12-3P01733 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV12-3P01733 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV12-3P01733 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV12-3P01733 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
TRBV12-3P01733 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV12-3P01733 PCDHB17P-201ENST00000539533 2393 ntBASIC13.13□□□□□ -0.31
TRBV12-3P01733 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV12-3P01733 AD000864.1-201ENST00000624076 2295 ntBASIC13.13□□□□□ -0.31
TRBV12-3P01733 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC13.13□□□□□ -0.31
TRBV12-3P01733 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV12-3P01733 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.13□□□□□ -0.31
TRBV12-3P01733 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV12-3P01733 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV12-3P01733 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV12-3P01733 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV12-3P01733 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV12-3P01733 MRPL20P1-201ENST00000400819 433 ntBASIC13.13□□□□□ -0.31
TRBV12-3P01733 AP000347.1-202ENST00000435868 847 ntBASIC13.13□□□□□ -0.31
TRBV12-3P01733 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.13□□□□□ -0.31
TRBV12-3P01733 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.13□□□□□ -0.31
TRBV12-3P01733 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.13□□□□□ -0.31
TRBV12-3P01733 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV12-3P01733 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.13□□□□□ -0.31
TRBV12-3P01733 AC034105.1-201ENST00000563488 319 ntBASIC13.13□□□□□ -0.31
TRBV12-3P01733 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
TRBV12-3P01733 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.13□□□□□ -0.31
TRBV12-3P01733 GGTLC5P-201ENST00000617623 998 ntBASIC13.13□□□□□ -0.31
TRBV12-3P01733 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV12-3P01733 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRBV12-3P01733 AC105020.1-201ENST00000435356 2205 ntBASIC13.13□□□□□ -0.31
TRBV12-3P01733 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.13□□□□□ -0.31
TRBV12-3P01733 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms