Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 AC023511.2-201ENST00000618803 211 ntBASIC17.44■□□□□ 0.38
MT-CO1P00395 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MT-CO1P00395 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
MT-CO1P00395 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.44■□□□□ 0.38
MT-CO1P00395 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MT-CO1P00395 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MT-CO1P00395 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MT-CO1P00395 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
MT-CO1P00395 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.44■□□□□ 0.38
MT-CO1P00395 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.44■□□□□ 0.38
MT-CO1P00395 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MT-CO1P00395 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.44■□□□□ 0.38
MT-CO1P00395 CROCCP1-201ENST00000426910 5675 ntBASIC17.44■□□□□ 0.38
MT-CO1P00395 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MT-CO1P00395 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.44■□□□□ 0.38
MT-CO1P00395 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
MT-CO1P00395 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MT-CO1P00395 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
MT-CO1P00395 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MT-CO1P00395 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
MT-CO1P00395 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MT-CO1P00395 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MT-CO1P00395 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
MT-CO1P00395 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.43■□□□□ 0.38
MT-CO1P00395 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
MT-CO1P00395 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MT-CO1P00395 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
MT-CO1P00395 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
MT-CO1P00395 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.43■□□□□ 0.38
MT-CO1P00395 RNA5SP416-201ENST00000516838 111 ntBASIC17.43■□□□□ 0.38
MT-CO1P00395 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
MT-CO1P00395 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.43■□□□□ 0.38
MT-CO1P00395 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.43■□□□□ 0.38
MT-CO1P00395 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.43■□□□□ 0.38
MT-CO1P00395 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.43■□□□□ 0.38
MT-CO1P00395 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.43■□□□□ 0.38
MT-CO1P00395 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.43■□□□□ 0.38
MT-CO1P00395 AC010654.1-201ENST00000615722 808 ntBASIC17.43■□□□□ 0.38
MT-CO1P00395 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
MT-CO1P00395 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
MT-CO1P00395 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
MT-CO1P00395 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
MT-CO1P00395 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MT-CO1P00395 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
MT-CO1P00395 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
MT-CO1P00395 AC084018.2-201ENST00000613093 2607 ntBASIC17.43■□□□□ 0.38
MT-CO1P00395 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
MT-CO1P00395 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.43■□□□□ 0.38
MT-CO1P00395 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MT-CO1P00395 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
MT-CO1P00395 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
MT-CO1P00395 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
MT-CO1P00395 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
MT-CO1P00395 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
MT-CO1P00395 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
MT-CO1P00395 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MT-CO1P00395 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MT-CO1P00395 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MT-CO1P00395 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MT-CO1P00395 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.42■□□□□ 0.38
MT-CO1P00395 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.42■□□□□ 0.38
MT-CO1P00395 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.42■□□□□ 0.38
MT-CO1P00395 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MT-CO1P00395 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.42■□□□□ 0.38
MT-CO1P00395 AC023274.1-201ENST00000418278 595 ntBASIC17.42■□□□□ 0.38
MT-CO1P00395 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.42■□□□□ 0.38
MT-CO1P00395 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.42■□□□□ 0.38
MT-CO1P00395 AC018845.2-201ENST00000568326 409 ntBASIC17.42■□□□□ 0.38
MT-CO1P00395 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
MT-CO1P00395 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.42■□□□□ 0.38
MT-CO1P00395 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MT-CO1P00395 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
MT-CO1P00395 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MT-CO1P00395 AL023806.1-201ENST00000603994 1649 ntBASIC17.42■□□□□ 0.38
MT-CO1P00395 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MT-CO1P00395 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
MT-CO1P00395 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
MT-CO1P00395 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MT-CO1P00395 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
MT-CO1P00395 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.42■□□□□ 0.38
MT-CO1P00395 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
MT-CO1P00395 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.42■□□□□ 0.38
MT-CO1P00395 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
MT-CO1P00395 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.42■□□□□ 0.38
MT-CO1P00395 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
MT-CO1P00395 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MT-CO1P00395 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MT-CO1P00395 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MT-CO1P00395 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.41■□□□□ 0.38
MT-CO1P00395 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MT-CO1P00395 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MT-CO1P00395 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.41■□□□□ 0.38
MT-CO1P00395 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MT-CO1P00395 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MT-CO1P00395 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
MT-CO1P00395 EGFEM1P-202ENST00000431685 1563 ntBASIC17.41■□□□□ 0.38
MT-CO1P00395 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
MT-CO1P00395 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.41■□□□□ 0.38
MT-CO1P00395 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
MT-CO1P00395 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms