Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC19.53■□□□□ 0.72
MBD3O95983 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3O95983 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.53■□□□□ 0.72
MBD3O95983 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3O95983 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.53■□□□□ 0.72
MBD3O95983 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3O95983 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.53■□□□□ 0.72
MBD3O95983 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
MBD3O95983 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.53■□□□□ 0.72
MBD3O95983 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
MBD3O95983 STK19B-204ENST00000512515 211 ntBASIC19.53■□□□□ 0.72
MBD3O95983 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3O95983 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.53■□□□□ 0.72
MBD3O95983 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3O95983 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.53■□□□□ 0.72
MBD3O95983 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.53■□□□□ 0.72
MBD3O95983 AC140113.3-201ENST00000605663 199 ntBASIC19.53■□□□□ 0.72
MBD3O95983 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.53■□□□□ 0.72
MBD3O95983 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3O95983 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.53■□□□□ 0.72
MBD3O95983 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3O95983 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3O95983 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3O95983 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3O95983 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
MBD3O95983 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3O95983 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3O95983 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC19.53■□□□□ 0.72
MBD3O95983 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3O95983 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.53■□□□□ 0.72
MBD3O95983 AL353593.2-201ENST00000602529 1483 ntBASIC19.53■□□□□ 0.72
MBD3O95983 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3O95983 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC19.53■□□□□ 0.72
MBD3O95983 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
MBD3O95983 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC19.53■□□□□ 0.72
MBD3O95983 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3O95983 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.53■□□□□ 0.72
MBD3O95983 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.53■□□□□ 0.72
MBD3O95983 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.53■□□□□ 0.72
MBD3O95983 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
MBD3O95983 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3O95983 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3O95983 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MBD3O95983 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.52■□□□□ 0.72
MBD3O95983 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MBD3O95983 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
MBD3O95983 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
MBD3O95983 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
MBD3O95983 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MBD3O95983 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MBD3O95983 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MBD3O95983 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MBD3O95983 TSPY26P-202ENST00000565928 3884 ntBASIC19.52■□□□□ 0.72
MBD3O95983 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MBD3O95983 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
MBD3O95983 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MBD3O95983 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MBD3O95983 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.52■□□□□ 0.72
MBD3O95983 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
MBD3O95983 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MBD3O95983 MMP23A-201ENST00000234610 1017 ntBASIC19.52■□□□□ 0.72
MBD3O95983 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
MBD3O95983 STARP1-201ENST00000397973 869 ntBASIC19.52■□□□□ 0.72
MBD3O95983 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
MBD3O95983 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MBD3O95983 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.52■□□□□ 0.72
MBD3O95983 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.52■□□□□ 0.72
MBD3O95983 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.52■□□□□ 0.72
MBD3O95983 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.52■□□□□ 0.72
MBD3O95983 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.52■□□□□ 0.72
MBD3O95983 AL390719.2-201ENST00000606993 987 ntBASIC19.52■□□□□ 0.72
MBD3O95983 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
MBD3O95983 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
MBD3O95983 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
MBD3O95983 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MBD3O95983 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
MBD3O95983 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MBD3O95983 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MBD3O95983 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MBD3O95983 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
MBD3O95983 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MBD3O95983 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MBD3O95983 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
MBD3O95983 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
MBD3O95983 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
MBD3O95983 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.52■□□□□ 0.71
MBD3O95983 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
MBD3O95983 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
MBD3O95983 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.51■□□□□ 0.71
MBD3O95983 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3O95983 AC125634.1-201ENST00000438758 1403 ntBASIC19.51■□□□□ 0.71
MBD3O95983 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3O95983 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3O95983 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC19.51■□□□□ 0.71
MBD3O95983 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3O95983 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3O95983 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC19.51■□□□□ 0.71
MBD3O95983 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MBD3O95983 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
MBD3O95983 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms