Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.51■□□□□ 0.07
CLPXO76031 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.51■□□□□ 0.07
CLPXO76031 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CLPXO76031 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.51■□□□□ 0.07
CLPXO76031 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.51■□□□□ 0.07
CLPXO76031 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.51■□□□□ 0.07
CLPXO76031 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPXO76031 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLPXO76031 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.51■□□□□ 0.07
CLPXO76031 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPXO76031 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.51■□□□□ 0.07
CLPXO76031 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPXO76031 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPXO76031 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CLPXO76031 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPXO76031 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.51■□□□□ 0.07
CLPXO76031 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPXO76031 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLPXO76031 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.51■□□□□ 0.07
CLPXO76031 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLPXO76031 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.51■□□□□ 0.07
CLPXO76031 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLPXO76031 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPXO76031 AC073347.1-201ENST00000421633 2643 ntBASIC15.5■□□□□ 0.07
CLPXO76031 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.5■□□□□ 0.07
CLPXO76031 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.5■□□□□ 0.07
CLPXO76031 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLPXO76031 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPXO76031 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPXO76031 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.5■□□□□ 0.07
CLPXO76031 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPXO76031 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPXO76031 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.5■□□□□ 0.07
CLPXO76031 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLPXO76031 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPXO76031 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPXO76031 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.5■□□□□ 0.07
CLPXO76031 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.5■□□□□ 0.07
CLPXO76031 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPXO76031 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLPXO76031 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLPXO76031 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPXO76031 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.5■□□□□ 0.07
CLPXO76031 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.5■□□□□ 0.07
CLPXO76031 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.5■□□□□ 0.07
CLPXO76031 C2orf69P3-201ENST00000565542 1120 ntBASIC15.5■□□□□ 0.07
CLPXO76031 AC010947.1-201ENST00000623454 693 ntBASIC15.5■□□□□ 0.07
CLPXO76031 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.5■□□□□ 0.07
CLPXO76031 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLPXO76031 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
CLPXO76031 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPXO76031 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CLPXO76031 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
CLPXO76031 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPXO76031 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CLPXO76031 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
CLPXO76031 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPXO76031 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPXO76031 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPXO76031 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.5■□□□□ 0.07
CLPXO76031 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPXO76031 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPXO76031 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CLPXO76031 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLPXO76031 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLPXO76031 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.49■□□□□ 0.07
CLPXO76031 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLPXO76031 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLPXO76031 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CLPXO76031 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLPXO76031 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLPXO76031 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.49■□□□□ 0.07
CLPXO76031 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CLPXO76031 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CLPXO76031 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CLPXO76031 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLPXO76031 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLPXO76031 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLPXO76031 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.49■□□□□ 0.07
CLPXO76031 CYP2D8P-201ENST00000433633 1490 ntBASIC15.49■□□□□ 0.07
CLPXO76031 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.49■□□□□ 0.07
CLPXO76031 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLPXO76031 AL137013.1-201ENST00000432946 1228 ntBASIC15.49■□□□□ 0.07
CLPXO76031 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.49■□□□□ 0.07
CLPXO76031 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLPXO76031 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.49■□□□□ 0.07
CLPXO76031 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.49■□□□□ 0.07
CLPXO76031 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.49■□□□□ 0.07
CLPXO76031 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.49■□□□□ 0.07
CLPXO76031 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.49■□□□□ 0.07
CLPXO76031 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLPXO76031 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.49■□□□□ 0.07
CLPXO76031 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.49■□□□□ 0.07
CLPXO76031 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.49■□□□□ 0.07
CLPXO76031 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
CLPXO76031 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLPXO76031 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLPXO76031 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CLPXO76031 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.49■□□□□ 0.07
CLPXO76031 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms