Protein–RNA interactions for Protein: O75437

ZNF254, Zinc finger protein 254, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF254O75437 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
ZNF254O75437 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.13■□□□□ 0.01
ZNF254O75437 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF254O75437 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF254O75437 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF254O75437 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF254O75437 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF254O75437 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF254O75437 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF254O75437 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF254O75437 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF254O75437 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF254O75437 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.13■□□□□ 0.01
ZNF254O75437 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ZNF254O75437 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
ZNF254O75437 LINC00554-201ENST00000564841 3011 ntBASIC15.13■□□□□ 0.01
ZNF254O75437 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF254O75437 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.13■□□□□ 0.01
ZNF254O75437 AC132938.5-201ENST00000624980 1813 ntBASIC15.13■□□□□ 0.01
ZNF254O75437 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF254O75437 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF254O75437 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.12■□□□□ 0.01
ZNF254O75437 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF254O75437 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF254O75437 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF254O75437 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.12■□□□□ 0.01
ZNF254O75437 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF254O75437 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF254O75437 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF254O75437 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF254O75437 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF254O75437 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF254O75437 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF254O75437 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.12■□□□□ 0.01
ZNF254O75437 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC15.12■□□□□ 0.01
ZNF254O75437 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.12■□□□□ 0.01
ZNF254O75437 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.12■□□□□ 0.01
ZNF254O75437 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.12■□□□□ 0.01
ZNF254O75437 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF254O75437 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF254O75437 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF254O75437 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF254O75437 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF254O75437 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
ZNF254O75437 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF254O75437 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ZNF254O75437 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF254O75437 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF254O75437 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC15.12■□□□□ 0.01
ZNF254O75437 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF254O75437 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.12■□□□□ 0.01
ZNF254O75437 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF254O75437 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
ZNF254O75437 FRMD8P1-201ENST00000440433 1524 ntBASIC15.12■□□□□ 0.01
ZNF254O75437 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF254O75437 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.12■□□□□ 0.01
ZNF254O75437 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF254O75437 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.12■□□□□ 0.01
ZNF254O75437 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ZNF254O75437 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
ZNF254O75437 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ZNF254O75437 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF254O75437 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF254O75437 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF254O75437 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ZNF254O75437 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF254O75437 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF254O75437 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF254O75437 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF254O75437 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
ZNF254O75437 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ZNF254O75437 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF254O75437 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF254O75437 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF254O75437 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF254O75437 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.11■□□□□ 0.01
ZNF254O75437 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF254O75437 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF254O75437 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.11■□□□□ 0.01
ZNF254O75437 RCN1P1-201ENST00000400413 996 ntBASIC15.11■□□□□ 0.01
ZNF254O75437 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
ZNF254O75437 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.11■□□□□ 0.01
ZNF254O75437 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF254O75437 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF254O75437 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.11■□□□□ 0.01
ZNF254O75437 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.11■□□□□ 0.01
ZNF254O75437 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.11■□□□□ 0.01
ZNF254O75437 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.11■□□□□ 0.01
ZNF254O75437 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.11■□□□□ 0.01
ZNF254O75437 NTF6B-201ENST00000591913 560 ntBASIC15.11■□□□□ 0.01
ZNF254O75437 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.11■□□□□ 0.01
ZNF254O75437 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF254O75437 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.11■□□□□ 0.01
ZNF254O75437 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF254O75437 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.11■□□□□ 0.01
ZNF254O75437 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF254O75437 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF254O75437 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
ZNF254O75437 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ZNF254O75437 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms