Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PFDN1O60925 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PFDN1O60925 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
PFDN1O60925 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
PFDN1O60925 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.18■□□□□ 0.02
PFDN1O60925 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PFDN1O60925 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PFDN1O60925 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PFDN1O60925 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PFDN1O60925 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
PFDN1O60925 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
PFDN1O60925 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC15.18■□□□□ 0.02
PFDN1O60925 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PFDN1O60925 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC15.18■□□□□ 0.02
PFDN1O60925 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PFDN1O60925 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PFDN1O60925 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PFDN1O60925 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PFDN1O60925 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
PFDN1O60925 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PFDN1O60925 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.18■□□□□ 0.02
PFDN1O60925 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
PFDN1O60925 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
PFDN1O60925 NT5C3AP1-201ENST00000394500 1012 ntBASIC15.18■□□□□ 0.02
PFDN1O60925 RARRES2P1-201ENST00000474487 481 ntBASIC15.18■□□□□ 0.02
PFDN1O60925 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC15.18■□□□□ 0.02
PFDN1O60925 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
PFDN1O60925 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
PFDN1O60925 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PFDN1O60925 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PFDN1O60925 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.18■□□□□ 0.02
PFDN1O60925 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PFDN1O60925 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PFDN1O60925 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PFDN1O60925 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PFDN1O60925 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PFDN1O60925 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
PFDN1O60925 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.18■□□□□ 0.02
PFDN1O60925 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC15.18■□□□□ 0.02
PFDN1O60925 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.18■□□□□ 0.02
PFDN1O60925 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PFDN1O60925 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.18■□□□□ 0.02
PFDN1O60925 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC15.18■□□□□ 0.02
PFDN1O60925 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
PFDN1O60925 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC15.18■□□□□ 0.02
PFDN1O60925 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PFDN1O60925 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PFDN1O60925 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC15.17■□□□□ 0.02
PFDN1O60925 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
PFDN1O60925 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.17■□□□□ 0.02
PFDN1O60925 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.17■□□□□ 0.02
PFDN1O60925 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PFDN1O60925 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PFDN1O60925 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.17■□□□□ 0.02
PFDN1O60925 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PFDN1O60925 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
PFDN1O60925 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PFDN1O60925 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PFDN1O60925 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PFDN1O60925 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PFDN1O60925 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PFDN1O60925 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PFDN1O60925 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PFDN1O60925 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PFDN1O60925 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PFDN1O60925 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
PFDN1O60925 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC15.17■□□□□ 0.02
PFDN1O60925 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PFDN1O60925 OR2A1-AS1-204ENST00000470435 602 ntBASIC15.17■□□□□ 0.02
PFDN1O60925 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC15.17■□□□□ 0.02
PFDN1O60925 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC15.17■□□□□ 0.02
PFDN1O60925 SLC7A5P1-201ENST00000568957 537 ntBASIC15.17■□□□□ 0.02
PFDN1O60925 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC15.17■□□□□ 0.02
PFDN1O60925 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC15.17■□□□□ 0.02
PFDN1O60925 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PFDN1O60925 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PFDN1O60925 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
PFDN1O60925 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PFDN1O60925 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PFDN1O60925 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.17■□□□□ 0.02
PFDN1O60925 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC15.17■□□□□ 0.02
PFDN1O60925 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
PFDN1O60925 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.17■□□□□ 0.02
PFDN1O60925 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PFDN1O60925 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PFDN1O60925 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PFDN1O60925 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
PFDN1O60925 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PFDN1O60925 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.17■□□□□ 0.02
PFDN1O60925 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PFDN1O60925 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PFDN1O60925 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PFDN1O60925 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PFDN1O60925 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PFDN1O60925 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.17■□□□□ 0.02
PFDN1O60925 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PFDN1O60925 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PFDN1O60925 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.17■□□□□ 0.02
PFDN1O60925 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PFDN1O60925 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms