Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.94■□□□□ 0.3
KLHL41O60662 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL41O60662 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL41O60662 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL41O60662 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.94■□□□□ 0.3
KLHL41O60662 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL41O60662 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL41O60662 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL41O60662 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
KLHL41O60662 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL41O60662 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.94■□□□□ 0.3
KLHL41O60662 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KLHL41O60662 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL41O60662 AC006449.5-201ENST00000610658 2098 ntBASIC16.93■□□□□ 0.3
KLHL41O60662 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL41O60662 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.93■□□□□ 0.3
KLHL41O60662 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL41O60662 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL41O60662 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
KLHL41O60662 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL41O60662 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL41O60662 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.93■□□□□ 0.3
KLHL41O60662 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.93■□□□□ 0.3
KLHL41O60662 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL41O60662 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL41O60662 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.93■□□□□ 0.3
KLHL41O60662 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL41O60662 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.93■□□□□ 0.3
KLHL41O60662 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
KLHL41O60662 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
KLHL41O60662 MINOS1P3-201ENST00000457048 203 ntBASIC16.93■□□□□ 0.3
KLHL41O60662 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL41O60662 RN7SL606P-201ENST00000472779 293 ntBASIC16.93■□□□□ 0.3
KLHL41O60662 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.93■□□□□ 0.3
KLHL41O60662 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.93■□□□□ 0.3
KLHL41O60662 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL41O60662 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL41O60662 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
KLHL41O60662 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL41O60662 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL41O60662 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.93■□□□□ 0.3
KLHL41O60662 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.93■□□□□ 0.3
KLHL41O60662 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.93■□□□□ 0.3
KLHL41O60662 AL121912.1-201ENST00000603683 238 ntBASIC16.93■□□□□ 0.3
KLHL41O60662 AL732292.2-201ENST00000609649 430 ntBASIC16.93■□□□□ 0.3
KLHL41O60662 AL353801.3-201ENST00000609898 542 ntBASIC16.93■□□□□ 0.3
KLHL41O60662 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.93■□□□□ 0.3
KLHL41O60662 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.93■□□□□ 0.3
KLHL41O60662 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL41O60662 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL41O60662 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
KLHL41O60662 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL41O60662 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.93■□□□□ 0.3
KLHL41O60662 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL41O60662 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL41O60662 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.93■□□□□ 0.3
KLHL41O60662 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.93■□□□□ 0.3
KLHL41O60662 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL41O60662 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL41O60662 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL41O60662 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL41O60662 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL41O60662 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL41O60662 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.93■□□□□ 0.3
KLHL41O60662 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.93■□□□□ 0.3
KLHL41O60662 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KLHL41O60662 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
KLHL41O60662 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
KLHL41O60662 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.92■□□□□ 0.3
KLHL41O60662 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL41O60662 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL41O60662 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL41O60662 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL41O60662 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.92■□□□□ 0.3
KLHL41O60662 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL41O60662 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL41O60662 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
KLHL41O60662 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL41O60662 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.92■□□□□ 0.3
KLHL41O60662 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL41O60662 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.92■□□□□ 0.3
KLHL41O60662 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL41O60662 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.92■□□□□ 0.3
KLHL41O60662 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL41O60662 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL41O60662 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL41O60662 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL41O60662 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL41O60662 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL41O60662 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL41O60662 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
KLHL41O60662 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
KLHL41O60662 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL41O60662 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.92■□□□□ 0.3
KLHL41O60662 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
KLHL41O60662 AC138894.3-201ENST00000603787 634 ntBASIC16.92■□□□□ 0.3
KLHL41O60662 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KLHL41O60662 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
KLHL41O60662 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.92■□□□□ 0.3
KLHL41O60662 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms