Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PLOD3O60568 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.08■□□□□ 0.16
PLOD3O60568 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PLOD3O60568 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PLOD3O60568 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.08■□□□□ 0.16
PLOD3O60568 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PLOD3O60568 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PLOD3O60568 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PLOD3O60568 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PLOD3O60568 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PLOD3O60568 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PLOD3O60568 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PLOD3O60568 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PLOD3O60568 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.07■□□□□ 0.16
PLOD3O60568 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PLOD3O60568 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PLOD3O60568 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PLOD3O60568 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PLOD3O60568 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PLOD3O60568 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PLOD3O60568 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PLOD3O60568 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PLOD3O60568 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PLOD3O60568 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PLOD3O60568 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PLOD3O60568 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.07■□□□□ 0.16
PLOD3O60568 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PLOD3O60568 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PLOD3O60568 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.07■□□□□ 0.16
PLOD3O60568 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PLOD3O60568 AL353135.1-201ENST00000606729 504 ntBASIC16.07■□□□□ 0.16
PLOD3O60568 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PLOD3O60568 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.07■□□□□ 0.16
PLOD3O60568 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PLOD3O60568 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PLOD3O60568 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PLOD3O60568 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.07■□□□□ 0.16
PLOD3O60568 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.07■□□□□ 0.16
PLOD3O60568 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PLOD3O60568 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PLOD3O60568 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PLOD3O60568 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PLOD3O60568 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PLOD3O60568 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PLOD3O60568 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
PLOD3O60568 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PLOD3O60568 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.06■□□□□ 0.16
PLOD3O60568 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PLOD3O60568 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
PLOD3O60568 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PLOD3O60568 AL118508.1-201ENST00000613502 2345 ntBASIC16.06■□□□□ 0.16
PLOD3O60568 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PLOD3O60568 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PLOD3O60568 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PLOD3O60568 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PLOD3O60568 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.06■□□□□ 0.16
PLOD3O60568 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PLOD3O60568 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PLOD3O60568 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.06■□□□□ 0.16
PLOD3O60568 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PLOD3O60568 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.06■□□□□ 0.16
PLOD3O60568 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PLOD3O60568 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.06■□□□□ 0.16
PLOD3O60568 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PLOD3O60568 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
PLOD3O60568 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.06■□□□□ 0.16
PLOD3O60568 MTDHP4-201ENST00000600287 670 ntBASIC16.06■□□□□ 0.16
PLOD3O60568 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PLOD3O60568 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PLOD3O60568 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PLOD3O60568 CICP6-201ENST00000457191 2729 ntBASIC16.06■□□□□ 0.16
PLOD3O60568 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PLOD3O60568 AC092053.1-201ENST00000605787 1936 ntBASIC16.06■□□□□ 0.16
PLOD3O60568 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PLOD3O60568 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PLOD3O60568 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PLOD3O60568 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PLOD3O60568 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PLOD3O60568 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PLOD3O60568 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PLOD3O60568 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.05■□□□□ 0.16
PLOD3O60568 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.05■□□□□ 0.16
PLOD3O60568 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.05■□□□□ 0.16
PLOD3O60568 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PLOD3O60568 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.05■□□□□ 0.16
PLOD3O60568 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.05■□□□□ 0.16
PLOD3O60568 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PLOD3O60568 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PLOD3O60568 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PLOD3O60568 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PLOD3O60568 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
PLOD3O60568 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PLOD3O60568 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PLOD3O60568 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PLOD3O60568 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.05■□□□□ 0.16
PLOD3O60568 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.05■□□□□ 0.16
PLOD3O60568 AC064862.7-201ENST00000604520 867 ntBASIC16.05■□□□□ 0.16
PLOD3O60568 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.05■□□□□ 0.16
PLOD3O60568 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PLOD3O60568 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms