Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RIPK2O43353 AC003669.1-201ENST00000334569 611 ntBASIC17.3■□□□□ 0.36
RIPK2O43353 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RIPK2O43353 AL845331.1-201ENST00000424978 1190 ntBASIC17.3■□□□□ 0.36
RIPK2O43353 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.3■□□□□ 0.36
RIPK2O43353 GUSBP12-201ENST00000513727 720 ntBASIC17.3■□□□□ 0.36
RIPK2O43353 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.3■□□□□ 0.36
RIPK2O43353 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
RIPK2O43353 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.3■□□□□ 0.36
RIPK2O43353 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.3■□□□□ 0.36
RIPK2O43353 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RIPK2O43353 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RIPK2O43353 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RIPK2O43353 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RIPK2O43353 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RIPK2O43353 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RIPK2O43353 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.3■□□□□ 0.36
RIPK2O43353 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
RIPK2O43353 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RIPK2O43353 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RIPK2O43353 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.3■□□□□ 0.36
RIPK2O43353 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.3■□□□□ 0.36
RIPK2O43353 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RIPK2O43353 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.29■□□□□ 0.36
RIPK2O43353 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RIPK2O43353 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.29■□□□□ 0.36
RIPK2O43353 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RIPK2O43353 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RIPK2O43353 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.29■□□□□ 0.36
RIPK2O43353 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RIPK2O43353 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.29■□□□□ 0.36
RIPK2O43353 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RIPK2O43353 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RIPK2O43353 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RIPK2O43353 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RIPK2O43353 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.29■□□□□ 0.36
RIPK2O43353 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RIPK2O43353 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.29■□□□□ 0.36
RIPK2O43353 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.29■□□□□ 0.36
RIPK2O43353 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.29■□□□□ 0.36
RIPK2O43353 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.29■□□□□ 0.36
RIPK2O43353 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.29■□□□□ 0.36
RIPK2O43353 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.29■□□□□ 0.36
RIPK2O43353 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RIPK2O43353 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.29■□□□□ 0.36
RIPK2O43353 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
RIPK2O43353 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RIPK2O43353 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RIPK2O43353 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.29■□□□□ 0.36
RIPK2O43353 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RIPK2O43353 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.29■□□□□ 0.36
RIPK2O43353 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.29■□□□□ 0.36
RIPK2O43353 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RIPK2O43353 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RIPK2O43353 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RIPK2O43353 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
RIPK2O43353 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RIPK2O43353 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RIPK2O43353 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RIPK2O43353 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RIPK2O43353 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RIPK2O43353 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RIPK2O43353 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RIPK2O43353 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.28■□□□□ 0.36
RIPK2O43353 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RIPK2O43353 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RIPK2O43353 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RIPK2O43353 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RIPK2O43353 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RIPK2O43353 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RIPK2O43353 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RIPK2O43353 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.28■□□□□ 0.36
RIPK2O43353 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RIPK2O43353 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.28■□□□□ 0.36
RIPK2O43353 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RIPK2O43353 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RIPK2O43353 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RIPK2O43353 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RIPK2O43353 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.28■□□□□ 0.36
RIPK2O43353 KLF4P1-201ENST00000412782 1185 ntBASIC17.28■□□□□ 0.36
RIPK2O43353 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.28■□□□□ 0.36
RIPK2O43353 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RIPK2O43353 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RIPK2O43353 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RIPK2O43353 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RIPK2O43353 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RIPK2O43353 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RIPK2O43353 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RIPK2O43353 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.28■□□□□ 0.36
RIPK2O43353 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RIPK2O43353 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.28■□□□□ 0.36
RIPK2O43353 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RIPK2O43353 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RIPK2O43353 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RIPK2O43353 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RIPK2O43353 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RIPK2O43353 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RIPK2O43353 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.28■□□□□ 0.36
RIPK2O43353 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RIPK2O43353 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms