Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA2E9PIF3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
NPIPA2E9PIF3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.51■□□□□ 0.07
NPIPA2E9PIF3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.51■□□□□ 0.07
NPIPA2E9PIF3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.51■□□□□ 0.07
NPIPA2E9PIF3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
NPIPA2E9PIF3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.51■□□□□ 0.07
NPIPA2E9PIF3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA2E9PIF3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NPIPA2E9PIF3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.51■□□□□ 0.07
NPIPA2E9PIF3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA2E9PIF3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA2E9PIF3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA2E9PIF3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.51■□□□□ 0.07
NPIPA2E9PIF3 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
NPIPA2E9PIF3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA2E9PIF3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NPIPA2E9PIF3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
NPIPA2E9PIF3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.51■□□□□ 0.07
NPIPA2E9PIF3 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NPIPA2E9PIF3 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 BCAR1-209ENST00000546196 1340 ntBASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 AL590787.1-201ENST00000568856 1315 ntBASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 DNAJB3-202ENST00000449667 1266 ntBASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 ALG1L5P-201ENST00000482043 771 ntBASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 AL596442.2-201ENST00000610240 980 ntBASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 AC010507.1-201ENST00000633895 436 ntBASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPIPA2E9PIF3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
NPIPA2E9PIF3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPA2E9PIF3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
NPIPA2E9PIF3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
NPIPA2E9PIF3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPA2E9PIF3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
NPIPA2E9PIF3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPA2E9PIF3 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
NPIPA2E9PIF3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPA2E9PIF3 AC139713.2-201ENST00000641328 2723 ntBASIC15.49■□□□□ 0.07
NPIPA2E9PIF3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
NPIPA2E9PIF3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
NPIPA2E9PIF3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPA2E9PIF3 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPA2E9PIF3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPIPA2E9PIF3 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.49■□□□□ 0.07
NPIPA2E9PIF3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.49■□□□□ 0.07
NPIPA2E9PIF3 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.49■□□□□ 0.07
NPIPA2E9PIF3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.49■□□□□ 0.07
NPIPA2E9PIF3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.49■□□□□ 0.07
NPIPA2E9PIF3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.49■□□□□ 0.07
NPIPA2E9PIF3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.49■□□□□ 0.07
NPIPA2E9PIF3 AC096734.2-201ENST00000562054 433 ntBASIC15.49■□□□□ 0.07
NPIPA2E9PIF3 OR7E47P-204ENST00000575924 449 ntBASIC15.49■□□□□ 0.07
NPIPA2E9PIF3 MIR4469-201ENST00000583919 79 ntBASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms