Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPDC1A2A3K4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC20.01■□□□□ 0.79
PTPDC1A2A3K4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPDC1A2A3K4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPDC1A2A3K4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPDC1A2A3K4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPDC1A2A3K4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PTPDC1A2A3K4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20■□□□□ 0.79
PTPDC1A2A3K4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
PTPDC1A2A3K4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20■□□□□ 0.79
PTPDC1A2A3K4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPDC1A2A3K4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
PTPDC1A2A3K4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPDC1A2A3K4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20■□□□□ 0.79
PTPDC1A2A3K4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20■□□□□ 0.79
PTPDC1A2A3K4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
PTPDC1A2A3K4 AC108751.1-201ENST00000490852 363 ntBASIC20■□□□□ 0.79
PTPDC1A2A3K4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPDC1A2A3K4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20■□□□□ 0.79
PTPDC1A2A3K4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPDC1A2A3K4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20■□□□□ 0.79
PTPDC1A2A3K4 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PTPDC1A2A3K4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
PTPDC1A2A3K4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PTPDC1A2A3K4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PTPDC1A2A3K4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC20■□□□□ 0.79
PTPDC1A2A3K4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20■□□□□ 0.79
PTPDC1A2A3K4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PTPDC1A2A3K4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
PTPDC1A2A3K4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20■□□□□ 0.79
PTPDC1A2A3K4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20■□□□□ 0.79
PTPDC1A2A3K4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20■□□□□ 0.79
PTPDC1A2A3K4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PTPDC1A2A3K4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PTPDC1A2A3K4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPDC1A2A3K4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPDC1A2A3K4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.99■□□□□ 0.79
PTPDC1A2A3K4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PTPDC1A2A3K4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.99■□□□□ 0.79
PTPDC1A2A3K4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPDC1A2A3K4 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.99■□□□□ 0.79
PTPDC1A2A3K4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.99■□□□□ 0.79
PTPDC1A2A3K4 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPDC1A2A3K4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
PTPDC1A2A3K4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPDC1A2A3K4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPDC1A2A3K4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPDC1A2A3K4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPDC1A2A3K4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPDC1A2A3K4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.99■□□□□ 0.79
PTPDC1A2A3K4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PTPDC1A2A3K4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPDC1A2A3K4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PTPDC1A2A3K4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PTPDC1A2A3K4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PTPDC1A2A3K4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
PTPDC1A2A3K4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPDC1A2A3K4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPDC1A2A3K4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PTPDC1A2A3K4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPDC1A2A3K4 MIR1233-2-201ENST00000408138 82 ntBASIC19.98■□□□□ 0.79
PTPDC1A2A3K4 MIR1233-1-201ENST00000408722 82 ntBASIC19.98■□□□□ 0.79
PTPDC1A2A3K4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PTPDC1A2A3K4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.98■□□□□ 0.79
PTPDC1A2A3K4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.98■□□□□ 0.79
PTPDC1A2A3K4 RNA5SP416-201ENST00000516838 111 ntBASIC19.98■□□□□ 0.79
PTPDC1A2A3K4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.98■□□□□ 0.79
PTPDC1A2A3K4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.98■□□□□ 0.79
PTPDC1A2A3K4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.98■□□□□ 0.79
PTPDC1A2A3K4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PTPDC1A2A3K4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPDC1A2A3K4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.98■□□□□ 0.79
PTPDC1A2A3K4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PTPDC1A2A3K4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPDC1A2A3K4 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPDC1A2A3K4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.98■□□□□ 0.79
PTPDC1A2A3K4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPDC1A2A3K4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PTPDC1A2A3K4 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
PTPDC1A2A3K4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.98■□□□□ 0.79
PTPDC1A2A3K4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPDC1A2A3K4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPDC1A2A3K4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PTPDC1A2A3K4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 AC124067.4-201ENST00000519691 2379 ntBASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PTPDC1A2A3K4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms