Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC196A0A1B0GTZ2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC196A0A1B0GTZ2 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
CCDC196A0A1B0GTZ2 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC196A0A1B0GTZ2 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC196A0A1B0GTZ2 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC196A0A1B0GTZ2 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC196A0A1B0GTZ2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC196A0A1B0GTZ2 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC196A0A1B0GTZ2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC196A0A1B0GTZ2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC196A0A1B0GTZ2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CCDC196A0A1B0GTZ2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC196A0A1B0GTZ2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC196A0A1B0GTZ2 MRPL20P1-201ENST00000400819 433 ntBASIC19.77■□□□□ 0.76
CCDC196A0A1B0GTZ2 AC098831.1-202ENST00000438821 336 ntBASIC19.77■□□□□ 0.76
CCDC196A0A1B0GTZ2 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC196A0A1B0GTZ2 FDX1P1-201ENST00000449115 551 ntBASIC19.77■□□□□ 0.76
CCDC196A0A1B0GTZ2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.77■□□□□ 0.76
CCDC196A0A1B0GTZ2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.77■□□□□ 0.76
CCDC196A0A1B0GTZ2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC196A0A1B0GTZ2 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC196A0A1B0GTZ2 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
CCDC196A0A1B0GTZ2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC196A0A1B0GTZ2 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CCDC196A0A1B0GTZ2 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.77■□□□□ 0.76
CCDC196A0A1B0GTZ2 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC196A0A1B0GTZ2 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.75
CCDC196A0A1B0GTZ2 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CCDC196A0A1B0GTZ2 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 PCDHB17P-201ENST00000539533 2393 ntBASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 SLC25A6P2-201ENST00000497974 877 ntBASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 REXO1L3P-201ENST00000622202 1288 ntBASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 AL139384.1-201ENST00000612143 3047 ntBASIC19.76■□□□□ 0.75
CCDC196A0A1B0GTZ2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC196A0A1B0GTZ2 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
CCDC196A0A1B0GTZ2 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC196A0A1B0GTZ2 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC196A0A1B0GTZ2 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC196A0A1B0GTZ2 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC196A0A1B0GTZ2 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC196A0A1B0GTZ2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC196A0A1B0GTZ2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC196A0A1B0GTZ2 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC196A0A1B0GTZ2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC196A0A1B0GTZ2 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC196A0A1B0GTZ2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC196A0A1B0GTZ2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC196A0A1B0GTZ2 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.75■□□□□ 0.75
CCDC196A0A1B0GTZ2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
CCDC196A0A1B0GTZ2 PRSS29P-201ENST00000440800 595 ntBASIC19.75■□□□□ 0.75
CCDC196A0A1B0GTZ2 AC108073.2-201ENST00000464002 357 ntBASIC19.75■□□□□ 0.75
CCDC196A0A1B0GTZ2 IGHV3-22-201ENST00000520721 359 ntBASIC19.75■□□□□ 0.75
CCDC196A0A1B0GTZ2 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC196A0A1B0GTZ2 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC196A0A1B0GTZ2 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC196A0A1B0GTZ2 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC196A0A1B0GTZ2 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC196A0A1B0GTZ2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC196A0A1B0GTZ2 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC196A0A1B0GTZ2 AC011270.2-201ENST00000624293 2550 ntBASIC19.75■□□□□ 0.75
CCDC196A0A1B0GTZ2 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC196A0A1B0GTZ2 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC196A0A1B0GTZ2 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC196A0A1B0GTZ2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC196A0A1B0GTZ2 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC196A0A1B0GTZ2 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CCDC196A0A1B0GTZ2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC196A0A1B0GTZ2 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC196A0A1B0GTZ2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms