Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 U1.21-201ENST00000580816 167 ntBASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 AC027307.2-201ENST00000591252 911 ntBASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 AP001350.2-201ENST00000625104 1094 ntBASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CCDC187A0A096LP49 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC187A0A096LP49 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC187A0A096LP49 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC187A0A096LP49 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.05■□□□□ 0.16
CCDC187A0A096LP49 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC187A0A096LP49 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CCDC187A0A096LP49 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CCDC187A0A096LP49 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC187A0A096LP49 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC187A0A096LP49 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC187A0A096LP49 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC187A0A096LP49 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC187A0A096LP49 MIR661-201ENST00000384842 89 ntBASIC16.05■□□□□ 0.16
CCDC187A0A096LP49 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC187A0A096LP49 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CCDC187A0A096LP49 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC187A0A096LP49 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC187A0A096LP49 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.05■□□□□ 0.16
CCDC187A0A096LP49 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC187A0A096LP49 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.05■□□□□ 0.16
CCDC187A0A096LP49 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CCDC187A0A096LP49 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC187A0A096LP49 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC187A0A096LP49 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
CCDC187A0A096LP49 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC187A0A096LP49 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC187A0A096LP49 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC187A0A096LP49 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC187A0A096LP49 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CCDC187A0A096LP49 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 AL390961.4-201ENST00000623958 2535 ntBASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 AC097493.3-201ENST00000509725 367 ntBASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC187A0A096LP49 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC187A0A096LP49 TOP3BP1-201ENST00000420768 1380 ntBASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms