Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 SART3-203ENST00000546611 1184 ntBASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 REXO1L6P-202ENST00000619970 1078 ntBASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CYP46A1Q9Y6A2 AL603756.1-201ENST00000606511 2163 ntBASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 AL139424.1-201ENST00000607572 797 ntBASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.18■□□□□ 0.82
CYP46A1Q9Y6A2 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CYP46A1Q9Y6A2 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CYP46A1Q9Y6A2 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CYP46A1Q9Y6A2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CYP46A1Q9Y6A2 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CYP46A1Q9Y6A2 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.17■□□□□ 0.82
CYP46A1Q9Y6A2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CYP46A1Q9Y6A2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.17■□□□□ 0.82
CYP46A1Q9Y6A2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.17■□□□□ 0.82
CYP46A1Q9Y6A2 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CYP46A1Q9Y6A2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CYP46A1Q9Y6A2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC20.17■□□□□ 0.82
CYP46A1Q9Y6A2 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.17■□□□□ 0.82
CYP46A1Q9Y6A2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.17■□□□□ 0.82
CYP46A1Q9Y6A2 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.17■□□□□ 0.82
CYP46A1Q9Y6A2 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.17■□□□□ 0.82
CYP46A1Q9Y6A2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.17■□□□□ 0.82
CYP46A1Q9Y6A2 MTDHP4-201ENST00000600287 670 ntBASIC20.17■□□□□ 0.82
CYP46A1Q9Y6A2 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CYP46A1Q9Y6A2 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CYP46A1Q9Y6A2 AL391256.1-201ENST00000443260 1855 ntBASIC20.17■□□□□ 0.82
CYP46A1Q9Y6A2 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CYP46A1Q9Y6A2 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CYP46A1Q9Y6A2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CYP46A1Q9Y6A2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CYP46A1Q9Y6A2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CYP46A1Q9Y6A2 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CYP46A1Q9Y6A2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
CYP46A1Q9Y6A2 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CYP46A1Q9Y6A2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CYP46A1Q9Y6A2 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.16■□□□□ 0.82
CYP46A1Q9Y6A2 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CYP46A1Q9Y6A2 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms