Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA11Q9Y5H2 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA11Q9Y5H2 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGA11Q9Y5H2 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGA11Q9Y5H2 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGA11Q9Y5H2 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PCDHGA11Q9Y5H2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 KRT18P31-201ENST00000506277 1292 ntBASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 PRELID1P1-202ENST00000567272 903 ntBASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 AL732292.2-201ENST00000609649 430 ntBASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 AL139288.1-201ENST00000623748 933 ntBASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 FRMD8P1-201ENST00000440433 1524 ntBASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 AC004817.3-201ENST00000602957 2129 ntBASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGA11Q9Y5H2 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 TSPY19P-201ENST00000418461 509 ntBASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 LINC00982-205ENST00000420957 435 ntBASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 TSPY18P-201ENST00000441642 509 ntBASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 AC091304.2-201ENST00000564639 760 ntBASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 LINC01711-201ENST00000598340 967 ntBASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHGA11Q9Y5H2 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGA11Q9Y5H2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
PCDHGA11Q9Y5H2 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA11Q9Y5H2 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHGA11Q9Y5H2 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA11Q9Y5H2 AC092068.3-201ENST00000587894 2016 ntBASIC16.52■□□□□ 0.24
PCDHGA11Q9Y5H2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA11Q9Y5H2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PCDHGA11Q9Y5H2 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHGA11Q9Y5H2 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms