Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
L1RE1Q9UN81 RPS2P28-201ENST00000314255 741 ntBASIC18.65■□□□□ 0.58
L1RE1Q9UN81 AL590627.1-203ENST00000421194 1026 ntBASIC18.65■□□□□ 0.58
L1RE1Q9UN81 LAGE3P1-201ENST00000425356 484 ntBASIC18.65■□□□□ 0.58
L1RE1Q9UN81 AC093909.1-201ENST00000504731 1122 ntBASIC18.65■□□□□ 0.58
L1RE1Q9UN81 AC139887.3-201ENST00000568585 713 ntBASIC18.65■□□□□ 0.58
L1RE1Q9UN81 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.65■□□□□ 0.58
L1RE1Q9UN81 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.65■□□□□ 0.58
L1RE1Q9UN81 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.65■□□□□ 0.58
L1RE1Q9UN81 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.65■□□□□ 0.58
L1RE1Q9UN81 AC008735.5-201ENST00000623544 497 ntBASIC18.65■□□□□ 0.58
L1RE1Q9UN81 AC116407.3-201ENST00000623905 1129 ntBASIC18.65■□□□□ 0.58
L1RE1Q9UN81 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
L1RE1Q9UN81 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
L1RE1Q9UN81 IL9RP2-201ENST00000423948 1312 ntBASIC18.65■□□□□ 0.58
L1RE1Q9UN81 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
L1RE1Q9UN81 HCG11-201ENST00000411553 5696 ntBASIC18.65■□□□□ 0.58
L1RE1Q9UN81 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
L1RE1Q9UN81 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
L1RE1Q9UN81 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
L1RE1Q9UN81 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
L1RE1Q9UN81 BCL2-203ENST00000589955 5011 ntBASIC18.65■□□□□ 0.58
L1RE1Q9UN81 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.65■□□□□ 0.58
L1RE1Q9UN81 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
L1RE1Q9UN81 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.65■□□□□ 0.58
L1RE1Q9UN81 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
L1RE1Q9UN81 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
L1RE1Q9UN81 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
L1RE1Q9UN81 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.64■□□□□ 0.58
L1RE1Q9UN81 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
L1RE1Q9UN81 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
L1RE1Q9UN81 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
L1RE1Q9UN81 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.64■□□□□ 0.58
L1RE1Q9UN81 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
L1RE1Q9UN81 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
L1RE1Q9UN81 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
L1RE1Q9UN81 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.64■□□□□ 0.57
L1RE1Q9UN81 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
L1RE1Q9UN81 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.64■□□□□ 0.57
L1RE1Q9UN81 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.64■□□□□ 0.57
L1RE1Q9UN81 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
L1RE1Q9UN81 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.64■□□□□ 0.57
L1RE1Q9UN81 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.64■□□□□ 0.57
L1RE1Q9UN81 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.64■□□□□ 0.57
L1RE1Q9UN81 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.64■□□□□ 0.57
L1RE1Q9UN81 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
L1RE1Q9UN81 AC120114.3-201ENST00000611923 658 ntBASIC18.64■□□□□ 0.57
L1RE1Q9UN81 AL139327.4-201ENST00000612362 153 ntBASIC18.64■□□□□ 0.57
L1RE1Q9UN81 BX640515.1-201ENST00000617215 977 ntBASIC18.64■□□□□ 0.57
L1RE1Q9UN81 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
L1RE1Q9UN81 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
L1RE1Q9UN81 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
L1RE1Q9UN81 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
L1RE1Q9UN81 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
L1RE1Q9UN81 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
L1RE1Q9UN81 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
L1RE1Q9UN81 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
L1RE1Q9UN81 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
L1RE1Q9UN81 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
L1RE1Q9UN81 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
L1RE1Q9UN81 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
L1RE1Q9UN81 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
L1RE1Q9UN81 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 LINC00554-201ENST00000564841 3011 ntBASIC18.63■□□□□ 0.57
L1RE1Q9UN81 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 ANKRD26P3-201ENST00000454044 2748 ntBASIC18.63■□□□□ 0.57
L1RE1Q9UN81 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 AP002414.3-201ENST00000589352 1468 ntBASIC18.63■□□□□ 0.57
L1RE1Q9UN81 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
L1RE1Q9UN81 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
L1RE1Q9UN81 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
L1RE1Q9UN81 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms