Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 HCG4B-203ENST00000450128 991 ntBASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 AC106730.1-201ENST00000566722 1090 ntBASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHA4Q9UN74 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHA4Q9UN74 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHA4Q9UN74 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHA4Q9UN74 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHA4Q9UN74 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHA4Q9UN74 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHA4Q9UN74 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHA4Q9UN74 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHA4Q9UN74 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHA4Q9UN74 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHA4Q9UN74 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHA4Q9UN74 FAM185BP-201ENST00000443595 716 ntBASIC19.4■□□□□ 0.7
PCDHA4Q9UN74 AP002490.2-201ENST00000524791 560 ntBASIC19.4■□□□□ 0.7
PCDHA4Q9UN74 MPDU1-223ENST00000582151 728 ntBASIC19.4■□□□□ 0.7
PCDHA4Q9UN74 ACTL9-202ENST00000612068 1252 ntBASIC19.4■□□□□ 0.7
PCDHA4Q9UN74 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.4■□□□□ 0.7
PCDHA4Q9UN74 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC19.4■□□□□ 0.7
PCDHA4Q9UN74 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHA4Q9UN74 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHA4Q9UN74 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.4■□□□□ 0.7
PCDHA4Q9UN74 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHA4Q9UN74 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PCDHA4Q9UN74 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHA4Q9UN74 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHA4Q9UN74 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHA4Q9UN74 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHA4Q9UN74 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHA4Q9UN74 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHA4Q9UN74 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHA4Q9UN74 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHA4Q9UN74 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
PCDHA4Q9UN74 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.39■□□□□ 0.7
PCDHA4Q9UN74 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
PCDHA4Q9UN74 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
PCDHA4Q9UN74 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHA4Q9UN74 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.39■□□□□ 0.69
PCDHA4Q9UN74 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PCDHA4Q9UN74 RNF216P1-203ENST00000404404 2427 ntBASIC19.39■□□□□ 0.69
PCDHA4Q9UN74 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHA4Q9UN74 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHA4Q9UN74 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PCDHA4Q9UN74 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHA4Q9UN74 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.39■□□□□ 0.69
PCDHA4Q9UN74 CXCL1P1-201ENST00000502804 216 ntBASIC19.39■□□□□ 0.69
PCDHA4Q9UN74 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHA4Q9UN74 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHA4Q9UN74 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHA4Q9UN74 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PCDHA4Q9UN74 ZNF259P1-201ENST00000407656 1365 ntBASIC19.39■□□□□ 0.69
PCDHA4Q9UN74 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHA4Q9UN74 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
PCDHA4Q9UN74 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHA4Q9UN74 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHA4Q9UN74 LINC00895-201ENST00000629028 1637 ntBASIC19.39■□□□□ 0.69
PCDHA4Q9UN74 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
PCDHA4Q9UN74 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHA4Q9UN74 AC078925.2-201ENST00000624013 1973 ntBASIC19.39■□□□□ 0.69
PCDHA4Q9UN74 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHA4Q9UN74 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHA4Q9UN74 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHA4Q9UN74 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHA4Q9UN74 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHA4Q9UN74 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDHA4Q9UN74 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHA4Q9UN74 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHA4Q9UN74 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHA4Q9UN74 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHA4Q9UN74 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
PCDHA4Q9UN74 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
PCDHA4Q9UN74 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDHA4Q9UN74 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHA4Q9UN74 PMS2P1-201ENST00000431037 1228 ntBASIC19.38■□□□□ 0.69
PCDHA4Q9UN74 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.38■□□□□ 0.69
PCDHA4Q9UN74 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHA4Q9UN74 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.38■□□□□ 0.69
PCDHA4Q9UN74 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.38■□□□□ 0.69
PCDHA4Q9UN74 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PCDHA4Q9UN74 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHA4Q9UN74 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDHA4Q9UN74 SLC22A20-204ENST00000530038 1673 ntBASIC19.38■□□□□ 0.69
PCDHA4Q9UN74 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms