Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SPASTQ9UBP0 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SPASTQ9UBP0 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SPASTQ9UBP0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPASTQ9UBP0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPASTQ9UBP0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SPASTQ9UBP0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SPASTQ9UBP0 FER1L4-210ENST00000615531 5998 ntBASIC16.96■□□□□ 0.31
SPASTQ9UBP0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.96■□□□□ 0.31
SPASTQ9UBP0 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPASTQ9UBP0 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPASTQ9UBP0 PI4KAP1-204ENST00000612579 1703 ntBASIC16.96■□□□□ 0.31
SPASTQ9UBP0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPASTQ9UBP0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPASTQ9UBP0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.96■□□□□ 0.31
SPASTQ9UBP0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.96■□□□□ 0.31
SPASTQ9UBP0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.96■□□□□ 0.31
SPASTQ9UBP0 AC096734.2-201ENST00000562054 433 ntBASIC16.96■□□□□ 0.31
SPASTQ9UBP0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SPASTQ9UBP0 AC092865.6-201ENST00000642101 219 ntBASIC16.96■□□□□ 0.31
SPASTQ9UBP0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPASTQ9UBP0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SPASTQ9UBP0 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPASTQ9UBP0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPASTQ9UBP0 AC099398.1-201ENST00000567919 2776 ntBASIC16.96■□□□□ 0.31
SPASTQ9UBP0 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SPASTQ9UBP0 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SPASTQ9UBP0 AC046185.3-201ENST00000623228 1824 ntBASIC16.96■□□□□ 0.3
SPASTQ9UBP0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.96■□□□□ 0.3
SPASTQ9UBP0 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.96■□□□□ 0.3
SPASTQ9UBP0 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.96■□□□□ 0.3
SPASTQ9UBP0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.96■□□□□ 0.3
SPASTQ9UBP0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.96■□□□□ 0.3
SPASTQ9UBP0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.96■□□□□ 0.3
SPASTQ9UBP0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.96■□□□□ 0.3
SPASTQ9UBP0 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SPASTQ9UBP0 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
SPASTQ9UBP0 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 C20orf181-201ENST00000623918 480 ntBASIC16.95■□□□□ 0.3
SPASTQ9UBP0 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SPASTQ9UBP0 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms