Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 RPS15P9-201ENST00000494093 319 ntBASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 AC092068.3-201ENST00000587894 2016 ntBASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 MIR1199-201ENST00000621445 119 ntBASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 AL805961.1-202ENST00000641562 540 ntBASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CUEDC1Q9NWM3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 AC022211.2-201ENST00000585075 2527 ntBASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 MIR940-201ENST00000401276 94 ntBASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 AC098831.1-202ENST00000438821 336 ntBASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 PI4KAP1-204ENST00000612579 1703 ntBASIC16.48■□□□□ 0.23
CUEDC1Q9NWM3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 AP002414.1-201ENST00000391405 1147 ntBASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CUEDC1Q9NWM3 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms