Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 EGFEM1P-202ENST00000431685 1563 ntBASIC15.91■□□□□ 0.14
RLIMQ9NVW2 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RLIMQ9NVW2 AL391005.1-201ENST00000623953 2435 ntBASIC15.9■□□□□ 0.14
RLIMQ9NVW2 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 NUS1P2-201ENST00000417358 873 ntBASIC15.9■□□□□ 0.14
RLIMQ9NVW2 POM121L3P-201ENST00000419331 1163 ntBASIC15.9■□□□□ 0.14
RLIMQ9NVW2 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.9■□□□□ 0.14
RLIMQ9NVW2 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RLIMQ9NVW2 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RLIMQ9NVW2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RLIMQ9NVW2 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RLIMQ9NVW2 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RLIMQ9NVW2 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RLIMQ9NVW2 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RLIMQ9NVW2 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RLIMQ9NVW2 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RLIMQ9NVW2 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
RLIMQ9NVW2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.89■□□□□ 0.13
RLIMQ9NVW2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.89■□□□□ 0.13
RLIMQ9NVW2 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.89■□□□□ 0.13
RLIMQ9NVW2 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RLIMQ9NVW2 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.89■□□□□ 0.13
RLIMQ9NVW2 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.89■□□□□ 0.13
RLIMQ9NVW2 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.89■□□□□ 0.13
RLIMQ9NVW2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.89■□□□□ 0.13
RLIMQ9NVW2 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RLIMQ9NVW2 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RLIMQ9NVW2 AP000867.4-201ENST00000641616 219 ntBASIC15.89■□□□□ 0.13
RLIMQ9NVW2 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.89■□□□□ 0.13
RLIMQ9NVW2 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RLIMQ9NVW2 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.89■□□□□ 0.13
RLIMQ9NVW2 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RLIMQ9NVW2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RLIMQ9NVW2 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.89■□□□□ 0.13
RLIMQ9NVW2 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.89■□□□□ 0.13
RLIMQ9NVW2 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RLIMQ9NVW2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.89■□□□□ 0.13
RLIMQ9NVW2 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms