Protein–RNA interactions for Protein: Q9NUS5

AP5S1, AP-5 complex subunit sigma-1, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP5S1Q9NUS5 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP5S1Q9NUS5 LINC02228-204ENST00000642115 2962 ntBASIC12.64□□□□□ -0.39
AP5S1Q9NUS5 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.64□□□□□ -0.39
AP5S1Q9NUS5 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP5S1Q9NUS5 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
AP5S1Q9NUS5 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
AP5S1Q9NUS5 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC12.64□□□□□ -0.39
AP5S1Q9NUS5 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP5S1Q9NUS5 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP5S1Q9NUS5 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
AP5S1Q9NUS5 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC12.64□□□□□ -0.39
AP5S1Q9NUS5 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
AP5S1Q9NUS5 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AP5S1Q9NUS5 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC12.64□□□□□ -0.39
AP5S1Q9NUS5 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP5S1Q9NUS5 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AP5S1Q9NUS5 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 KRT16P1-201ENST00000399124 1418 ntBASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 AC092053.1-201ENST00000605787 1936 ntBASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 PRORSD1P-201ENST00000295112 541 ntBASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 PEX7-202ENST00000367756 680 ntTSL 3 BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 AC004951.3-201ENST00000418645 1148 ntBASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 NIFKP9-201ENST00000419265 221 ntBASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 MIR3180-5-201ENST00000583743 153 ntBASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 RPS15-203ENST00000586096 570 ntTSL 2 BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 AL353708.3-201ENST00000610272 989 ntBASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP5S1Q9NUS5 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP5S1Q9NUS5 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.62□□□□□ -0.39
AP5S1Q9NUS5 KRT8P7-201ENST00000533003 1432 ntBASIC12.62□□□□□ -0.39
AP5S1Q9NUS5 HOXB1-202ENST00000577092 1414 ntBASIC12.62□□□□□ -0.39
AP5S1Q9NUS5 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP5S1Q9NUS5 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP5S1Q9NUS5 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC12.62□□□□□ -0.39
AP5S1Q9NUS5 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC12.62□□□□□ -0.39
AP5S1Q9NUS5 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP5S1Q9NUS5 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP5S1Q9NUS5 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP5S1Q9NUS5 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
AP5S1Q9NUS5 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
AP5S1Q9NUS5 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP5S1Q9NUS5 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.62□□□□□ -0.39
AP5S1Q9NUS5 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP5S1Q9NUS5 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.62□□□□□ -0.39
AP5S1Q9NUS5 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP5S1Q9NUS5 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC12.62□□□□□ -0.39
AP5S1Q9NUS5 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP5S1Q9NUS5 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC12.62□□□□□ -0.39
AP5S1Q9NUS5 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP5S1Q9NUS5 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP5S1Q9NUS5 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
AP5S1Q9NUS5 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP5S1Q9NUS5 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP5S1Q9NUS5 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP5S1Q9NUS5 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC12.62□□□□□ -0.39
AP5S1Q9NUS5 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP5S1Q9NUS5 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP5S1Q9NUS5 GCSHP5-201ENST00000443090 522 ntBASIC12.62□□□□□ -0.39
AP5S1Q9NUS5 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms