Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC024909.3-201ENST00000611513 2257 ntBASIC16.25■□□□□ 0.19
CCM2LQ9NUG4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.25■□□□□ 0.19
CCM2LQ9NUG4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCM2LQ9NUG4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCM2LQ9NUG4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CCM2LQ9NUG4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCM2LQ9NUG4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.25■□□□□ 0.19
CCM2LQ9NUG4 AC009078.2-202ENST00000463353 338 ntBASIC16.25■□□□□ 0.19
CCM2LQ9NUG4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.25■□□□□ 0.19
CCM2LQ9NUG4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCM2LQ9NUG4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.25■□□□□ 0.19
CCM2LQ9NUG4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.25■□□□□ 0.19
CCM2LQ9NUG4 AC024563.2-201ENST00000603282 481 ntBASIC16.25■□□□□ 0.19
CCM2LQ9NUG4 AL121672.3-201ENST00000608644 468 ntBASIC16.25■□□□□ 0.19
CCM2LQ9NUG4 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.25■□□□□ 0.19
CCM2LQ9NUG4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CCM2LQ9NUG4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCM2LQ9NUG4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCM2LQ9NUG4 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
CCM2LQ9NUG4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCM2LQ9NUG4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CCM2LQ9NUG4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.25■□□□□ 0.19
CCM2LQ9NUG4 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.25■□□□□ 0.19
CCM2LQ9NUG4 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.25■□□□□ 0.19
CCM2LQ9NUG4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 AC096633.1-201ENST00000422446 749 ntBASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 AC011498.5-201ENST00000592027 486 ntBASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 IFNL4P1-201ENST00000607083 540 ntBASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 AL157888.1-201ENST00000631930 593 ntBASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 HLA-A-202ENST00000376806 1854 ntBASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 AC016734.2-201ENST00000624325 1377 ntBASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CCM2LQ9NUG4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 AC092597.1-201ENST00000487352 616 ntBASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 MIR3180-1-201ENST00000580374 94 ntBASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 MIR3180-3-201ENST00000584616 94 ntBASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 PAUPAR-201ENST00000630360 2965 ntBASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CCM2LQ9NUG4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms