Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.91■□□□□ 0.62
VTA1Q9NP79 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VTA1Q9NP79 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
VTA1Q9NP79 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VTA1Q9NP79 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VTA1Q9NP79 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.91■□□□□ 0.62
VTA1Q9NP79 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.91■□□□□ 0.62
VTA1Q9NP79 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VTA1Q9NP79 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
VTA1Q9NP79 TREML5P-201ENST00000421694 576 ntBASIC18.91■□□□□ 0.62
VTA1Q9NP79 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
VTA1Q9NP79 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VTA1Q9NP79 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.91■□□□□ 0.62
VTA1Q9NP79 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.91■□□□□ 0.62
VTA1Q9NP79 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.91■□□□□ 0.62
VTA1Q9NP79 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.91■□□□□ 0.62
VTA1Q9NP79 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.91■□□□□ 0.62
VTA1Q9NP79 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VTA1Q9NP79 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VTA1Q9NP79 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.91■□□□□ 0.62
VTA1Q9NP79 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VTA1Q9NP79 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VTA1Q9NP79 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.91■□□□□ 0.62
VTA1Q9NP79 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VTA1Q9NP79 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.91■□□□□ 0.62
VTA1Q9NP79 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VTA1Q9NP79 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VTA1Q9NP79 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.9■□□□□ 0.62
VTA1Q9NP79 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VTA1Q9NP79 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.9■□□□□ 0.62
VTA1Q9NP79 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VTA1Q9NP79 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VTA1Q9NP79 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.9■□□□□ 0.62
VTA1Q9NP79 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
VTA1Q9NP79 LINC00895-201ENST00000629028 1637 ntBASIC18.9■□□□□ 0.62
VTA1Q9NP79 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
VTA1Q9NP79 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.9■□□□□ 0.62
VTA1Q9NP79 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
VTA1Q9NP79 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
VTA1Q9NP79 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VTA1Q9NP79 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VTA1Q9NP79 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VTA1Q9NP79 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
VTA1Q9NP79 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VTA1Q9NP79 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.9■□□□□ 0.62
VTA1Q9NP79 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
VTA1Q9NP79 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.9■□□□□ 0.62
VTA1Q9NP79 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.9■□□□□ 0.62
VTA1Q9NP79 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.9■□□□□ 0.62
VTA1Q9NP79 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.9■□□□□ 0.62
VTA1Q9NP79 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.9■□□□□ 0.62
VTA1Q9NP79 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VTA1Q9NP79 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.9■□□□□ 0.62
VTA1Q9NP79 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VTA1Q9NP79 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VTA1Q9NP79 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VTA1Q9NP79 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.9■□□□□ 0.62
VTA1Q9NP79 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VTA1Q9NP79 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
VTA1Q9NP79 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.9■□□□□ 0.62
VTA1Q9NP79 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.9■□□□□ 0.62
VTA1Q9NP79 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VTA1Q9NP79 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
VTA1Q9NP79 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
VTA1Q9NP79 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VTA1Q9NP79 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.9■□□□□ 0.62
VTA1Q9NP79 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.9■□□□□ 0.62
VTA1Q9NP79 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VTA1Q9NP79 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.9■□□□□ 0.62
VTA1Q9NP79 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VTA1Q9NP79 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
VTA1Q9NP79 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
VTA1Q9NP79 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
VTA1Q9NP79 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
VTA1Q9NP79 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
VTA1Q9NP79 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
VTA1Q9NP79 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VTA1Q9NP79 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.89■□□□□ 0.61
VTA1Q9NP79 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
VTA1Q9NP79 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VTA1Q9NP79 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.89■□□□□ 0.61
VTA1Q9NP79 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
VTA1Q9NP79 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.89■□□□□ 0.61
VTA1Q9NP79 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.89■□□□□ 0.61
VTA1Q9NP79 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.89■□□□□ 0.61
VTA1Q9NP79 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.89■□□□□ 0.61
VTA1Q9NP79 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VTA1Q9NP79 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.89■□□□□ 0.61
VTA1Q9NP79 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.89■□□□□ 0.61
VTA1Q9NP79 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VTA1Q9NP79 AC069120.2-201ENST00000524091 540 ntBASIC18.89■□□□□ 0.61
VTA1Q9NP79 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VTA1Q9NP79 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.89■□□□□ 0.61
VTA1Q9NP79 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
VTA1Q9NP79 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VTA1Q9NP79 LINC00896-202ENST00000609602 2128 ntBASIC18.89■□□□□ 0.61
VTA1Q9NP79 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.89■□□□□ 0.61
VTA1Q9NP79 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
VTA1Q9NP79 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VTA1Q9NP79 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms