Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 ELK2BP-201ENST00000415014 1224 ntBASIC14.92□□□□□ -0.02
CDH20Q9HBT6 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 HNRNPDP1-201ENST00000439535 754 ntBASIC14.92□□□□□ -0.02
CDH20Q9HBT6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 AC079776.4-201ENST00000511039 504 ntBASIC14.92□□□□□ -0.02
CDH20Q9HBT6 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 SLC25A6P4-201ENST00000586535 553 ntBASIC14.92□□□□□ -0.02
CDH20Q9HBT6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CDH20Q9HBT6 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH20Q9HBT6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.91□□□□□ -0.02
CDH20Q9HBT6 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
CDH20Q9HBT6 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH20Q9HBT6 AC084018.2-201ENST00000613093 2607 ntBASIC14.91□□□□□ -0.02
CDH20Q9HBT6 GPR89P-201ENST00000407924 1495 ntBASIC14.91□□□□□ -0.02
CDH20Q9HBT6 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH20Q9HBT6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH20Q9HBT6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH20Q9HBT6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.91□□□□□ -0.02
CDH20Q9HBT6 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH20Q9HBT6 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH20Q9HBT6 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.91□□□□□ -0.02
CDH20Q9HBT6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.91□□□□□ -0.02
CDH20Q9HBT6 AC136632.2-201ENST00000512891 861 ntBASIC14.91□□□□□ -0.02
CDH20Q9HBT6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH20Q9HBT6 AC005593.1-201ENST00000624894 515 ntBASIC14.91□□□□□ -0.02
CDH20Q9HBT6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC14.91□□□□□ -0.02
CDH20Q9HBT6 PGM5P2-202ENST00000637225 1043 ntBASIC14.91□□□□□ -0.02
CDH20Q9HBT6 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH20Q9HBT6 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH20Q9HBT6 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH20Q9HBT6 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.91□□□□□ -0.02
CDH20Q9HBT6 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CDH20Q9HBT6 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CDH20Q9HBT6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CDH20Q9HBT6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH20Q9HBT6 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CDH20Q9HBT6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CDH20Q9HBT6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH20Q9HBT6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.9□□□□□ -0.02
CDH20Q9HBT6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDH20Q9HBT6 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDH20Q9HBT6 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH20Q9HBT6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CDH20Q9HBT6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH20Q9HBT6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH20Q9HBT6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CDH20Q9HBT6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH20Q9HBT6 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH20Q9HBT6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH20Q9HBT6 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH20Q9HBT6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH20Q9HBT6 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CDH20Q9HBT6 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CDH20Q9HBT6 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH20Q9HBT6 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.9□□□□□ -0.02
CDH20Q9HBT6 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CDH20Q9HBT6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.9□□□□□ -0.02
CDH20Q9HBT6 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.9□□□□□ -0.02
CDH20Q9HBT6 AC092910.1-201ENST00000482027 1129 ntBASIC14.9□□□□□ -0.02
CDH20Q9HBT6 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CDH20Q9HBT6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.9□□□□□ -0.02
CDH20Q9HBT6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH20Q9HBT6 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.9□□□□□ -0.02
CDH20Q9HBT6 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH20Q9HBT6 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.9□□□□□ -0.02
CDH20Q9HBT6 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.9□□□□□ -0.02
CDH20Q9HBT6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms