Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
NELFAQ9H3P2 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NELFAQ9H3P2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELFAQ9H3P2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.21■□□□□ 0.03
NELFAQ9H3P2 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.21■□□□□ 0.03
NELFAQ9H3P2 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NELFAQ9H3P2 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.21■□□□□ 0.03
NELFAQ9H3P2 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.21■□□□□ 0.03
NELFAQ9H3P2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELFAQ9H3P2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELFAQ9H3P2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.21■□□□□ 0.03
NELFAQ9H3P2 AF186996.4-201ENST00000467186 377 ntBASIC15.21■□□□□ 0.03
NELFAQ9H3P2 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.21■□□□□ 0.03
NELFAQ9H3P2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.21■□□□□ 0.03
NELFAQ9H3P2 MIR7706-201ENST00000613747 67 ntBASIC15.21■□□□□ 0.03
NELFAQ9H3P2 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELFAQ9H3P2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
NELFAQ9H3P2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NELFAQ9H3P2 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NELFAQ9H3P2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NELFAQ9H3P2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NELFAQ9H3P2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
NELFAQ9H3P2 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
NELFAQ9H3P2 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
NELFAQ9H3P2 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
NELFAQ9H3P2 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 AC026396.1-201ENST00000419388 421 ntBASIC15.2■□□□□ 0.02
NELFAQ9H3P2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 AC124947.2-201ENST00000547118 1133 ntBASIC15.2■□□□□ 0.02
NELFAQ9H3P2 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 AC064862.7-201ENST00000604520 867 ntBASIC15.2■□□□□ 0.02
NELFAQ9H3P2 AL773604.1-201ENST00000617417 272 ntBASIC15.2■□□□□ 0.02
NELFAQ9H3P2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 AC107918.4-202ENST00000641623 219 ntBASIC15.2■□□□□ 0.02
NELFAQ9H3P2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 AD000864.1-201ENST00000624076 2295 ntBASIC15.2■□□□□ 0.02
NELFAQ9H3P2 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
NELFAQ9H3P2 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 AC060834.1-201ENST00000443027 2032 ntBASIC15.19■□□□□ 0.02
NELFAQ9H3P2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.19■□□□□ 0.02
NELFAQ9H3P2 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 AL049840.3-201ENST00000602669 611 ntBASIC15.19■□□□□ 0.02
NELFAQ9H3P2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 FAM215A-202ENST00000632077 792 ntBASIC15.19■□□□□ 0.02
NELFAQ9H3P2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
NELFAQ9H3P2 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms