Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
LIMD2Q9BT23 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LIMD2Q9BT23 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
LIMD2Q9BT23 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LIMD2Q9BT23 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LIMD2Q9BT23 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LIMD2Q9BT23 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LIMD2Q9BT23 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
LIMD2Q9BT23 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
LIMD2Q9BT23 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC10.21□□□□□ -0.77
LIMD2Q9BT23 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC10.21□□□□□ -0.77
LIMD2Q9BT23 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LIMD2Q9BT23 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
LIMD2Q9BT23 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
LIMD2Q9BT23 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
LIMD2Q9BT23 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
LIMD2Q9BT23 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
LIMD2Q9BT23 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
LIMD2Q9BT23 KRT18P38-201ENST00000449496 1282 ntBASIC10.21□□□□□ -0.77
LIMD2Q9BT23 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC10.21□□□□□ -0.77
LIMD2Q9BT23 AC002558.1-201ENST00000488906 803 ntBASIC10.21□□□□□ -0.77
LIMD2Q9BT23 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC10.21□□□□□ -0.77
LIMD2Q9BT23 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
LIMD2Q9BT23 COX5A-202ENST00000562233 441 ntTSL 3 BASIC10.21□□□□□ -0.77
LIMD2Q9BT23 COX5A-204ENST00000567270 579 ntTSL 3 BASIC10.21□□□□□ -0.77
LIMD2Q9BT23 AC111152.3-201ENST00000569699 673 ntBASIC10.21□□□□□ -0.77
LIMD2Q9BT23 AC011840.4-201ENST00000578471 627 ntBASIC10.21□□□□□ -0.77
LIMD2Q9BT23 RN7SL850P-201ENST00000579959 291 ntBASIC10.21□□□□□ -0.77
LIMD2Q9BT23 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
LIMD2Q9BT23 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC10.21□□□□□ -0.77
LIMD2Q9BT23 DBP-204ENST00000599385 709 ntTSL 3 BASIC10.21□□□□□ -0.77
LIMD2Q9BT23 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
LIMD2Q9BT23 WDR6-223ENST00000627177 207 ntTSL 2 BASIC10.21□□□□□ -0.77
LIMD2Q9BT23 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LIMD2Q9BT23 UBC-206ENST00000538617 1303 ntTSL 5 BASIC10.21□□□□□ -0.78
LIMD2Q9BT23 KRT8P47-201ENST00000604727 1398 ntBASIC10.21□□□□□ -0.78
LIMD2Q9BT23 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LIMD2Q9BT23 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LIMD2Q9BT23 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC10.21□□□□□ -0.78
LIMD2Q9BT23 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
LIMD2Q9BT23 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC10.21□□□□□ -0.78
LIMD2Q9BT23 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LIMD2Q9BT23 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC10.21□□□□□ -0.78
LIMD2Q9BT23 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.78
LIMD2Q9BT23 CTBP1-AS2-206ENST00000581398 5652 ntBASIC10.21□□□□□ -0.78
LIMD2Q9BT23 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC10.21□□□□□ -0.78
LIMD2Q9BT23 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LIMD2Q9BT23 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
LIMD2Q9BT23 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
LIMD2Q9BT23 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
LIMD2Q9BT23 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
LIMD2Q9BT23 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 AL355312.1-201ENST00000407115 2176 ntBASIC10.2□□□□□ -0.78
LIMD2Q9BT23 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 TSPY22P-201ENST00000427496 604 ntBASIC10.2□□□□□ -0.78
LIMD2Q9BT23 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 PXK-206ENST00000463280 2825 ntTSL 2 BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC10.2□□□□□ -0.78
LIMD2Q9BT23 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms