Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VRK1Q99986 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VRK1Q99986 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK1Q99986 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK1Q99986 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.11■□□□□ 0.01
VRK1Q99986 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.11■□□□□ 0.01
VRK1Q99986 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.11■□□□□ 0.01
VRK1Q99986 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
VRK1Q99986 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK1Q99986 RPS2P28-201ENST00000314255 741 ntBASIC15.11■□□□□ 0.01
VRK1Q99986 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.11■□□□□ 0.01
VRK1Q99986 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.11■□□□□ 0.01
VRK1Q99986 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VRK1Q99986 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC15.11■□□□□ 0.01
VRK1Q99986 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC15.11■□□□□ 0.01
VRK1Q99986 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.11■□□□□ 0.01
VRK1Q99986 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.11■□□□□ 0.01
VRK1Q99986 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.11■□□□□ 0.01
VRK1Q99986 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.11■□□□□ 0.01
VRK1Q99986 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
VRK1Q99986 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VRK1Q99986 AC148477.8-201ENST00000624298 468 ntBASIC15.11■□□□□ 0.01
VRK1Q99986 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
VRK1Q99986 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK1Q99986 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK1Q99986 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK1Q99986 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.11■□□□□ 0.01
VRK1Q99986 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
VRK1Q99986 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK1Q99986 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK1Q99986 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK1Q99986 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VRK1Q99986 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK1Q99986 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK1Q99986 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC15.11■□□□□ 0.01
VRK1Q99986 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.11■□□□□ 0.01
VRK1Q99986 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK1Q99986 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
VRK1Q99986 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
VRK1Q99986 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK1Q99986 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK1Q99986 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VRK1Q99986 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.11■□□□□ 0.01
VRK1Q99986 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
VRK1Q99986 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
VRK1Q99986 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.1■□□□□ 0.01
VRK1Q99986 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VRK1Q99986 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VRK1Q99986 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
VRK1Q99986 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VRK1Q99986 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VRK1Q99986 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VRK1Q99986 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VRK1Q99986 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
VRK1Q99986 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VRK1Q99986 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
VRK1Q99986 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.1■□□□□ 0.01
VRK1Q99986 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.1■□□□□ 0.01
VRK1Q99986 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VRK1Q99986 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
VRK1Q99986 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
VRK1Q99986 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VRK1Q99986 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VRK1Q99986 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.1■□□□□ 0.01
VRK1Q99986 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.1■□□□□ 0.01
VRK1Q99986 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.1■□□□□ 0.01
VRK1Q99986 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.1■□□□□ 0.01
VRK1Q99986 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.1■□□□□ 0.01
VRK1Q99986 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.1■□□□□ 0.01
VRK1Q99986 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.1■□□□□ 0.01
VRK1Q99986 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
VRK1Q99986 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VRK1Q99986 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.1■□□□□ 0.01
VRK1Q99986 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.1■□□□□ 0.01
VRK1Q99986 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.1■□□□□ 0.01
VRK1Q99986 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VRK1Q99986 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.1■□□□□ 0.01
VRK1Q99986 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
VRK1Q99986 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VRK1Q99986 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
VRK1Q99986 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VRK1Q99986 AC097374.2-201ENST00000618617 1306 ntBASIC15.1■□□□□ 0.01
VRK1Q99986 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
VRK1Q99986 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
VRK1Q99986 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.1■□□□□ 0.01
VRK1Q99986 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.1■□□□□ 0.01
VRK1Q99986 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.1■□□□□ 0.01
VRK1Q99986 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VRK1Q99986 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
VRK1Q99986 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
VRK1Q99986 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VRK1Q99986 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
VRK1Q99986 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.09■□□□□ 0.01
VRK1Q99986 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
VRK1Q99986 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
VRK1Q99986 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
VRK1Q99986 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
VRK1Q99986 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
VRK1Q99986 DOC2GP-204ENST00000639052 2548 ntBASIC15.09■□□□□ 0.01
VRK1Q99986 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms