Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CRAMP1Q96RY5 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CRAMP1Q96RY5 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CRAMP1Q96RY5 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CRAMP1Q96RY5 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CRAMP1Q96RY5 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CRAMP1Q96RY5 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC20.59■□□□□ 0.89
CRAMP1Q96RY5 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC20.59■□□□□ 0.89
CRAMP1Q96RY5 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CRAMP1Q96RY5 AC009407.1-201ENST00000568958 598 ntBASIC20.59■□□□□ 0.89
CRAMP1Q96RY5 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC20.59■□□□□ 0.89
CRAMP1Q96RY5 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.59■□□□□ 0.89
CRAMP1Q96RY5 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CRAMP1Q96RY5 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CRAMP1Q96RY5 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CRAMP1Q96RY5 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CRAMP1Q96RY5 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CRAMP1Q96RY5 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CRAMP1Q96RY5 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CRAMP1Q96RY5 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC20.59■□□□□ 0.89
CRAMP1Q96RY5 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CRAMP1Q96RY5 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CRAMP1Q96RY5 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CRAMP1Q96RY5 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CRAMP1Q96RY5 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CRAMP1Q96RY5 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CRAMP1Q96RY5 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.58■□□□□ 0.89
CRAMP1Q96RY5 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CRAMP1Q96RY5 AC087499.5-201ENST00000452760 1342 ntBASIC20.58■□□□□ 0.89
CRAMP1Q96RY5 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CRAMP1Q96RY5 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CRAMP1Q96RY5 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC20.58■□□□□ 0.89
CRAMP1Q96RY5 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC20.58■□□□□ 0.89
CRAMP1Q96RY5 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC20.58■□□□□ 0.89
CRAMP1Q96RY5 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CRAMP1Q96RY5 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CRAMP1Q96RY5 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.58■□□□□ 0.89
CRAMP1Q96RY5 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC20.58■□□□□ 0.89
CRAMP1Q96RY5 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC20.58■□□□□ 0.89
CRAMP1Q96RY5 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC20.58■□□□□ 0.89
CRAMP1Q96RY5 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CRAMP1Q96RY5 RAB34-223ENST00000636154 730 ntTSL 2 BASIC20.58■□□□□ 0.89
CRAMP1Q96RY5 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CRAMP1Q96RY5 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CRAMP1Q96RY5 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CRAMP1Q96RY5 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.57■□□□□ 0.88
CRAMP1Q96RY5 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CRAMP1Q96RY5 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CRAMP1Q96RY5 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.57■□□□□ 0.88
CRAMP1Q96RY5 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CRAMP1Q96RY5 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.57■□□□□ 0.88
CRAMP1Q96RY5 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CRAMP1Q96RY5 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.57■□□□□ 0.88
CRAMP1Q96RY5 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
CRAMP1Q96RY5 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.57■□□□□ 0.88
CRAMP1Q96RY5 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CRAMP1Q96RY5 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
CRAMP1Q96RY5 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CRAMP1Q96RY5 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CRAMP1Q96RY5 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC20.57■□□□□ 0.88
CRAMP1Q96RY5 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CRAMP1Q96RY5 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CRAMP1Q96RY5 AC108860.2-201ENST00000562760 2183 ntBASIC20.57■□□□□ 0.88
CRAMP1Q96RY5 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC20.57■□□□□ 0.88
CRAMP1Q96RY5 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC20.57■□□□□ 0.88
CRAMP1Q96RY5 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC20.57■□□□□ 0.88
CRAMP1Q96RY5 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.57■□□□□ 0.88
CRAMP1Q96RY5 TEX28P1-201ENST00000613479 1221 ntBASIC20.57■□□□□ 0.88
CRAMP1Q96RY5 TEX28P2-201ENST00000617764 1221 ntBASIC20.57■□□□□ 0.88
CRAMP1Q96RY5 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CRAMP1Q96RY5 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CRAMP1Q96RY5 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CRAMP1Q96RY5 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.57■□□□□ 0.88
CRAMP1Q96RY5 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CRAMP1Q96RY5 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CRAMP1Q96RY5 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC20.56■□□□□ 0.88
CRAMP1Q96RY5 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CRAMP1Q96RY5 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.56■□□□□ 0.88
CRAMP1Q96RY5 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CRAMP1Q96RY5 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CRAMP1Q96RY5 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CRAMP1Q96RY5 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CRAMP1Q96RY5 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.56■□□□□ 0.88
CRAMP1Q96RY5 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC20.56■□□□□ 0.88
CRAMP1Q96RY5 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CRAMP1Q96RY5 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CRAMP1Q96RY5 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC20.56■□□□□ 0.88
CRAMP1Q96RY5 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC20.56■□□□□ 0.88
CRAMP1Q96RY5 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC20.56■□□□□ 0.88
CRAMP1Q96RY5 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CRAMP1Q96RY5 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC20.56■□□□□ 0.88
CRAMP1Q96RY5 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CRAMP1Q96RY5 AL353705.2-201ENST00000428243 662 ntBASIC20.56■□□□□ 0.88
CRAMP1Q96RY5 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CRAMP1Q96RY5 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC20.56■□□□□ 0.88
CRAMP1Q96RY5 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC20.56■□□□□ 0.88
CRAMP1Q96RY5 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC20.56■□□□□ 0.88
CRAMP1Q96RY5 LITAF-210ENST00000571976 548 ntTSL 2 BASIC20.56■□□□□ 0.88
CRAMP1Q96RY5 LITAF-214ENST00000574703 486 ntTSL 2 BASIC20.56■□□□□ 0.88
CRAMP1Q96RY5 AL844908.2-201ENST00000609461 460 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms