Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FGD4Q96M96 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FGD4Q96M96 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FGD4Q96M96 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
FGD4Q96M96 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
FGD4Q96M96 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
FGD4Q96M96 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
FGD4Q96M96 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
FGD4Q96M96 RNU1-129P-201ENST00000384064 167 ntBASIC19.18■□□□□ 0.66
FGD4Q96M96 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.18■□□□□ 0.66
FGD4Q96M96 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.18■□□□□ 0.66
FGD4Q96M96 RBPMS2P1-201ENST00000437762 623 ntBASIC19.18■□□□□ 0.66
FGD4Q96M96 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
FGD4Q96M96 AC067863.1-201ENST00000494933 530 ntBASIC19.18■□□□□ 0.66
FGD4Q96M96 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.18■□□□□ 0.66
FGD4Q96M96 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.18■□□□□ 0.66
FGD4Q96M96 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.18■□□□□ 0.66
FGD4Q96M96 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.18■□□□□ 0.66
FGD4Q96M96 U1.21-201ENST00000580816 167 ntBASIC19.18■□□□□ 0.66
FGD4Q96M96 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
FGD4Q96M96 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.18■□□□□ 0.66
FGD4Q96M96 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FGD4Q96M96 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.18■□□□□ 0.66
FGD4Q96M96 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.18■□□□□ 0.66
FGD4Q96M96 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
FGD4Q96M96 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
FGD4Q96M96 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
FGD4Q96M96 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FGD4Q96M96 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FGD4Q96M96 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
FGD4Q96M96 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
FGD4Q96M96 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
FGD4Q96M96 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FGD4Q96M96 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FGD4Q96M96 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
FGD4Q96M96 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FGD4Q96M96 HARS-204ENST00000438307 1789 ntTSL 2 BASIC19.17■□□□□ 0.66
FGD4Q96M96 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FGD4Q96M96 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
FGD4Q96M96 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FGD4Q96M96 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FGD4Q96M96 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
FGD4Q96M96 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FGD4Q96M96 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FGD4Q96M96 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FGD4Q96M96 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
FGD4Q96M96 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FGD4Q96M96 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
FGD4Q96M96 CNN2P2-201ENST00000443536 909 ntBASIC19.17■□□□□ 0.66
FGD4Q96M96 CNN2P3-201ENST00000450201 906 ntBASIC19.17■□□□□ 0.66
FGD4Q96M96 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC19.17■□□□□ 0.66
FGD4Q96M96 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
FGD4Q96M96 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.17■□□□□ 0.66
FGD4Q96M96 AC026150.2-201ENST00000564693 1156 ntBASIC19.17■□□□□ 0.66
FGD4Q96M96 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC19.17■□□□□ 0.66
FGD4Q96M96 AL136317.3-201ENST00000618497 906 ntBASIC19.17■□□□□ 0.66
FGD4Q96M96 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.17■□□□□ 0.66
FGD4Q96M96 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.17■□□□□ 0.66
FGD4Q96M96 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FGD4Q96M96 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.17■□□□□ 0.66
FGD4Q96M96 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.17■□□□□ 0.66
FGD4Q96M96 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FGD4Q96M96 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.17■□□□□ 0.66
FGD4Q96M96 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
FGD4Q96M96 TOP3BP1-201ENST00000420768 1380 ntBASIC19.17■□□□□ 0.66
FGD4Q96M96 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
FGD4Q96M96 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.17■□□□□ 0.66
FGD4Q96M96 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FGD4Q96M96 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.16■□□□□ 0.66
FGD4Q96M96 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FGD4Q96M96 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
FGD4Q96M96 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FGD4Q96M96 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
FGD4Q96M96 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
FGD4Q96M96 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FGD4Q96M96 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FGD4Q96M96 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FGD4Q96M96 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FGD4Q96M96 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
FGD4Q96M96 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.16■□□□□ 0.66
FGD4Q96M96 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FGD4Q96M96 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.16■□□□□ 0.66
FGD4Q96M96 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.16■□□□□ 0.66
FGD4Q96M96 MIR661-201ENST00000384842 89 ntBASIC19.16■□□□□ 0.66
FGD4Q96M96 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.16■□□□□ 0.66
FGD4Q96M96 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.16■□□□□ 0.66
FGD4Q96M96 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.16■□□□□ 0.66
FGD4Q96M96 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
FGD4Q96M96 HCG4-201ENST00000418983 998 ntBASIC19.16■□□□□ 0.66
FGD4Q96M96 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.16■□□□□ 0.66
FGD4Q96M96 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
FGD4Q96M96 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FGD4Q96M96 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.16■□□□□ 0.66
FGD4Q96M96 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.16■□□□□ 0.66
FGD4Q96M96 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FGD4Q96M96 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
FGD4Q96M96 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FGD4Q96M96 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FGD4Q96M96 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
FGD4Q96M96 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms