Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC58Q96CX6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRC58Q96CX6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRC58Q96CX6 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC58Q96CX6 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LRRC58Q96CX6 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC58Q96CX6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.23■□□□□ 0.19
LRRC58Q96CX6 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LRRC58Q96CX6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 AL596257.1-201ENST00000641463 2694 ntBASIC16.22■□□□□ 0.19
LRRC58Q96CX6 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 AC132938.5-201ENST00000624980 1813 ntBASIC16.22■□□□□ 0.19
LRRC58Q96CX6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 AC003669.1-201ENST00000334569 611 ntBASIC16.22■□□□□ 0.19
LRRC58Q96CX6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 MIR1224-201ENST00000408193 85 ntBASIC16.22■□□□□ 0.19
LRRC58Q96CX6 TSPY5P-201ENST00000426936 936 ntBASIC16.22■□□□□ 0.19
LRRC58Q96CX6 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 ME2P1-201ENST00000426028 1970 ntBASIC16.22■□□□□ 0.19
LRRC58Q96CX6 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.22■□□□□ 0.19
LRRC58Q96CX6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 MTHFR-217ENST00000641820 1569 ntBASIC16.21■□□□□ 0.19
LRRC58Q96CX6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC58Q96CX6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
LRRC58Q96CX6 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
LRRC58Q96CX6 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LRRC58Q96CX6 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.21■□□□□ 0.18
LRRC58Q96CX6 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.21■□□□□ 0.18
LRRC58Q96CX6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.21■□□□□ 0.18
LRRC58Q96CX6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.21■□□□□ 0.18
LRRC58Q96CX6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.18
LRRC58Q96CX6 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC58Q96CX6 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms