Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HPS1Q92902 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
HPS1Q92902 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
HPS1Q92902 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HPS1Q92902 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HPS1Q92902 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
HPS1Q92902 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HPS1Q92902 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HPS1Q92902 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HPS1Q92902 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HPS1Q92902 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HPS1Q92902 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HPS1Q92902 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC15.67■□□□□ 0.1
HPS1Q92902 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.67■□□□□ 0.1
HPS1Q92902 HCG4P8-203ENST00000443049 980 ntBASIC15.67■□□□□ 0.1
HPS1Q92902 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.67■□□□□ 0.1
HPS1Q92902 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.67■□□□□ 0.1
HPS1Q92902 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.67■□□□□ 0.1
HPS1Q92902 MIR3180-4-201ENST00000582223 153 ntBASIC15.67■□□□□ 0.1
HPS1Q92902 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.67■□□□□ 0.1
HPS1Q92902 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.67■□□□□ 0.1
HPS1Q92902 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.67■□□□□ 0.1
HPS1Q92902 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HPS1Q92902 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HPS1Q92902 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HPS1Q92902 AC126755.1-201ENST00000525846 6405 ntBASIC15.67■□□□□ 0.1
HPS1Q92902 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HPS1Q92902 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HPS1Q92902 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HPS1Q92902 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.67■□□□□ 0.1
HPS1Q92902 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
HPS1Q92902 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HPS1Q92902 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
HPS1Q92902 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HPS1Q92902 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.66■□□□□ 0.1
HPS1Q92902 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HPS1Q92902 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HPS1Q92902 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HPS1Q92902 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.66■□□□□ 0.1
HPS1Q92902 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HPS1Q92902 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HPS1Q92902 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HPS1Q92902 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HPS1Q92902 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HPS1Q92902 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HPS1Q92902 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HPS1Q92902 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.66■□□□□ 0.1
HPS1Q92902 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.66■□□□□ 0.1
HPS1Q92902 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.66■□□□□ 0.1
HPS1Q92902 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.66■□□□□ 0.1
HPS1Q92902 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC15.66■□□□□ 0.1
HPS1Q92902 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HPS1Q92902 SPDYE15P-201ENST00000424157 909 ntBASIC15.66■□□□□ 0.1
HPS1Q92902 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HPS1Q92902 RASA4DP-201ENST00000460726 1199 ntBASIC15.66■□□□□ 0.1
HPS1Q92902 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
HPS1Q92902 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15.66■□□□□ 0.1
HPS1Q92902 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.66■□□□□ 0.1
HPS1Q92902 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.66■□□□□ 0.1
HPS1Q92902 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.66■□□□□ 0.1
HPS1Q92902 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC15.66■□□□□ 0.1
HPS1Q92902 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HPS1Q92902 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HPS1Q92902 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.66■□□□□ 0.1
HPS1Q92902 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HPS1Q92902 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.66■□□□□ 0.1
HPS1Q92902 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HPS1Q92902 CYP2T1P-202ENST00000641596 2535 ntBASIC15.66■□□□□ 0.1
HPS1Q92902 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HPS1Q92902 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
HPS1Q92902 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
HPS1Q92902 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HPS1Q92902 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HPS1Q92902 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.66■□□□□ 0.1
HPS1Q92902 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HPS1Q92902 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.66■□□□□ 0.1
HPS1Q92902 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
HPS1Q92902 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HPS1Q92902 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HPS1Q92902 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.65■□□□□ 0.1
HPS1Q92902 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HPS1Q92902 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HPS1Q92902 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HPS1Q92902 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.65■□□□□ 0.1
HPS1Q92902 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HPS1Q92902 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
HPS1Q92902 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.65■□□□□ 0.1
HPS1Q92902 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HPS1Q92902 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HPS1Q92902 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HPS1Q92902 AC092384.3-202ENST00000564646 2873 ntBASIC15.65■□□□□ 0.1
HPS1Q92902 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HPS1Q92902 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.65■□□□□ 0.1
HPS1Q92902 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HPS1Q92902 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.65■□□□□ 0.1
HPS1Q92902 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HPS1Q92902 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HPS1Q92902 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
HPS1Q92902 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HPS1Q92902 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms