Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.13■□□□□ 0.49
SHC3Q92529 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHC3Q92529 AF186996.4-201ENST00000467186 377 ntBASIC18.13■□□□□ 0.49
SHC3Q92529 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.13■□□□□ 0.49
SHC3Q92529 AC105339.3-201ENST00000560043 636 ntBASIC18.13■□□□□ 0.49
SHC3Q92529 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.13■□□□□ 0.49
SHC3Q92529 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.13■□□□□ 0.49
SHC3Q92529 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.13■□□□□ 0.49
SHC3Q92529 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SHC3Q92529 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.13■□□□□ 0.49
SHC3Q92529 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.13■□□□□ 0.49
SHC3Q92529 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHC3Q92529 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SHC3Q92529 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHC3Q92529 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.13■□□□□ 0.49
SHC3Q92529 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHC3Q92529 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.13■□□□□ 0.49
SHC3Q92529 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SHC3Q92529 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHC3Q92529 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SHC3Q92529 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.13■□□□□ 0.49
SHC3Q92529 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SHC3Q92529 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
SHC3Q92529 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHC3Q92529 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHC3Q92529 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHC3Q92529 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHC3Q92529 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHC3Q92529 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SHC3Q92529 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.12■□□□□ 0.49
SHC3Q92529 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.12■□□□□ 0.49
SHC3Q92529 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.12■□□□□ 0.49
SHC3Q92529 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SHC3Q92529 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHC3Q92529 KRT126P-201ENST00000549467 1181 ntBASIC18.12■□□□□ 0.49
SHC3Q92529 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.12■□□□□ 0.49
SHC3Q92529 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.12■□□□□ 0.49
SHC3Q92529 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.12■□□□□ 0.49
SHC3Q92529 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC18.12■□□□□ 0.49
SHC3Q92529 AC008667.4-201ENST00000607370 168 ntBASIC18.12■□□□□ 0.49
SHC3Q92529 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.12■□□□□ 0.49
SHC3Q92529 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SHC3Q92529 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHC3Q92529 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.12■□□□□ 0.49
SHC3Q92529 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
SHC3Q92529 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SHC3Q92529 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SHC3Q92529 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHC3Q92529 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.12■□□□□ 0.49
SHC3Q92529 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SHC3Q92529 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHC3Q92529 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.12■□□□□ 0.49
SHC3Q92529 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHC3Q92529 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.12■□□□□ 0.49
SHC3Q92529 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHC3Q92529 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SHC3Q92529 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.11■□□□□ 0.49
SHC3Q92529 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
SHC3Q92529 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.11■□□□□ 0.49
SHC3Q92529 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHC3Q92529 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHC3Q92529 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.11■□□□□ 0.49
SHC3Q92529 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.11■□□□□ 0.49
SHC3Q92529 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.11■□□□□ 0.49
SHC3Q92529 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.11■□□□□ 0.49
SHC3Q92529 AC107918.2-201ENST00000530817 355 ntBASIC18.11■□□□□ 0.49
SHC3Q92529 AP002469.2-201ENST00000531724 424 ntBASIC18.11■□□□□ 0.49
SHC3Q92529 MIR4492-201ENST00000581627 80 ntBASIC18.11■□□□□ 0.49
SHC3Q92529 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.11■□□□□ 0.49
SHC3Q92529 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SHC3Q92529 AL356488.2-201ENST00000602755 427 ntBASIC18.11■□□□□ 0.49
SHC3Q92529 GGTLC5P-201ENST00000617623 998 ntBASIC18.11■□□□□ 0.49
SHC3Q92529 FAM215A-202ENST00000632077 792 ntBASIC18.11■□□□□ 0.49
SHC3Q92529 AL139011.1-202ENST00000642063 584 ntBASIC18.11■□□□□ 0.49
SHC3Q92529 AP002414.3-201ENST00000589352 1468 ntBASIC18.11■□□□□ 0.49
SHC3Q92529 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.11■□□□□ 0.49
SHC3Q92529 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHC3Q92529 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHC3Q92529 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SHC3Q92529 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.11■□□□□ 0.49
SHC3Q92529 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.11■□□□□ 0.49
SHC3Q92529 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHC3Q92529 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.11■□□□□ 0.49
SHC3Q92529 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHC3Q92529 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SHC3Q92529 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
SHC3Q92529 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SHC3Q92529 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.1■□□□□ 0.49
SHC3Q92529 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHC3Q92529 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
SHC3Q92529 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.1■□□□□ 0.49
SHC3Q92529 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SHC3Q92529 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SHC3Q92529 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SHC3Q92529 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.1■□□□□ 0.49
SHC3Q92529 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHC3Q92529 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.1■□□□□ 0.49
SHC3Q92529 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHC3Q92529 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SHC3Q92529 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms