Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.39□□□□□ -0.27
MBD3L1Q8WWY6 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
MBD3L1Q8WWY6 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
MBD3L1Q8WWY6 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MBD3L1Q8WWY6 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
MBD3L1Q8WWY6 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
MBD3L1Q8WWY6 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MBD3L1Q8WWY6 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MBD3L1Q8WWY6 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
MBD3L1Q8WWY6 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC13.39□□□□□ -0.27
MBD3L1Q8WWY6 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MBD3L1Q8WWY6 TNRC18P2-201ENST00000417666 2714 ntBASIC13.39□□□□□ -0.27
MBD3L1Q8WWY6 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MBD3L1Q8WWY6 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.39□□□□□ -0.27
MBD3L1Q8WWY6 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.39□□□□□ -0.27
MBD3L1Q8WWY6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.39□□□□□ -0.27
MBD3L1Q8WWY6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
MBD3L1Q8WWY6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.39□□□□□ -0.27
MBD3L1Q8WWY6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
MBD3L1Q8WWY6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
MBD3L1Q8WWY6 AC092338.2-201ENST00000568827 1415 ntBASIC13.39□□□□□ -0.27
MBD3L1Q8WWY6 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
MBD3L1Q8WWY6 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 AC013268.4-201ENST00000637413 2228 ntBASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 AP005242.2-201ENST00000580065 1175 ntBASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 AC024563.2-201ENST00000603282 481 ntBASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 AP005117.1-202ENST00000581724 1908 ntBASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
MBD3L1Q8WWY6 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 AC010491.1-201ENST00000563101 2797 ntBASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 CD177P1-201ENST00000606252 935 ntBASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 AC097374.2-201ENST00000618617 1306 ntBASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
MBD3L1Q8WWY6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MBD3L1Q8WWY6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms