Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 INTS4P1-201ENST00000438455 1935 ntBASIC17.08■□□□□ 0.33
SLC44A1Q8WWI5 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SLC44A1Q8WWI5 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC44A1Q8WWI5 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC44A1Q8WWI5 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SLC44A1Q8WWI5 AC006538.1-201ENST00000567905 1585 ntBASIC17.08■□□□□ 0.32
SLC44A1Q8WWI5 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC44A1Q8WWI5 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC44A1Q8WWI5 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC44A1Q8WWI5 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC44A1Q8WWI5 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC44A1Q8WWI5 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC44A1Q8WWI5 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC44A1Q8WWI5 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC44A1Q8WWI5 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
SLC44A1Q8WWI5 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.08■□□□□ 0.32
SLC44A1Q8WWI5 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SLC44A1Q8WWI5 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC44A1Q8WWI5 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC44A1Q8WWI5 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC44A1Q8WWI5 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC44A1Q8WWI5 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC44A1Q8WWI5 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SLC44A1Q8WWI5 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SLC44A1Q8WWI5 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC44A1Q8WWI5 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
SLC44A1Q8WWI5 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC44A1Q8WWI5 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC44A1Q8WWI5 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 AP002414.1-201ENST00000391405 1147 ntBASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 CHCHD2P8-201ENST00000429873 447 ntBASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 SIGLEC30P-201ENST00000455569 941 ntBASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 LINC01238-205ENST00000567549 1107 ntBASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 NTF6B-201ENST00000591913 560 ntBASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC44A1Q8WWI5 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 AL021920.2-201ENST00000624828 1351 ntBASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.06■□□□□ 0.32
SLC44A1Q8WWI5 DUX4L26-201ENST00000489078 1255 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms