Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SMARCC2Q8TAQ2 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SMARCC2Q8TAQ2 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.94■□□□□ 0.78
SMARCC2Q8TAQ2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.94■□□□□ 0.78
SMARCC2Q8TAQ2 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCC2Q8TAQ2 AC006557.2-201ENST00000592985 1240 ntBASIC19.94■□□□□ 0.78
SMARCC2Q8TAQ2 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
SMARCC2Q8TAQ2 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.94■□□□□ 0.78
SMARCC2Q8TAQ2 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCC2Q8TAQ2 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCC2Q8TAQ2 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCC2Q8TAQ2 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SMARCC2Q8TAQ2 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.94■□□□□ 0.78
SMARCC2Q8TAQ2 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCC2Q8TAQ2 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCC2Q8TAQ2 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCC2Q8TAQ2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.94■□□□□ 0.78
SMARCC2Q8TAQ2 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCC2Q8TAQ2 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SMARCC2Q8TAQ2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SMARCC2Q8TAQ2 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMARCC2Q8TAQ2 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMARCC2Q8TAQ2 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.93■□□□□ 0.78
SMARCC2Q8TAQ2 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.93■□□□□ 0.78
SMARCC2Q8TAQ2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMARCC2Q8TAQ2 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMARCC2Q8TAQ2 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.93■□□□□ 0.78
SMARCC2Q8TAQ2 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMARCC2Q8TAQ2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMARCC2Q8TAQ2 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
SMARCC2Q8TAQ2 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMARCC2Q8TAQ2 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.93■□□□□ 0.78
SMARCC2Q8TAQ2 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19.93■□□□□ 0.78
SMARCC2Q8TAQ2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.93■□□□□ 0.78
SMARCC2Q8TAQ2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.93■□□□□ 0.78
SMARCC2Q8TAQ2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.93■□□□□ 0.78
SMARCC2Q8TAQ2 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMARCC2Q8TAQ2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMARCC2Q8TAQ2 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMARCC2Q8TAQ2 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMARCC2Q8TAQ2 AL590787.1-201ENST00000568856 1315 ntBASIC19.93■□□□□ 0.78
SMARCC2Q8TAQ2 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SMARCC2Q8TAQ2 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SMARCC2Q8TAQ2 AP002414.3-201ENST00000589352 1468 ntBASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 AL645728.1-201ENST00000366221 2101 ntBASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 MIR1199-201ENST00000621445 119 ntBASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SMARCC2Q8TAQ2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCC2Q8TAQ2 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCC2Q8TAQ2 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCC2Q8TAQ2 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCC2Q8TAQ2 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCC2Q8TAQ2 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCC2Q8TAQ2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCC2Q8TAQ2 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.91■□□□□ 0.78
SMARCC2Q8TAQ2 AC098831.1-202ENST00000438821 336 ntBASIC19.91■□□□□ 0.78
SMARCC2Q8TAQ2 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.91■□□□□ 0.78
SMARCC2Q8TAQ2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.91■□□□□ 0.78
SMARCC2Q8TAQ2 SLC25A1P1-201ENST00000528351 927 ntBASIC19.91■□□□□ 0.78
SMARCC2Q8TAQ2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.91■□□□□ 0.78
SMARCC2Q8TAQ2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.91■□□□□ 0.78
SMARCC2Q8TAQ2 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC19.91■□□□□ 0.78
SMARCC2Q8TAQ2 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.91■□□□□ 0.78
SMARCC2Q8TAQ2 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
SMARCC2Q8TAQ2 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SMARCC2Q8TAQ2 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SMARCC2Q8TAQ2 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms