Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 AC004461.1-201ENST00000412461 403 ntBASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 FAM86C2P-203ENST00000528684 1004 ntBASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 AC022145.2-201ENST00000598203 171 ntBASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 AC026120.1-201ENST00000611536 926 ntBASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.73■□□□□ 0.75
NEDD1Q8NHV4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
NEDD1Q8NHV4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEDD1Q8NHV4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
NEDD1Q8NHV4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEDD1Q8NHV4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEDD1Q8NHV4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NEDD1Q8NHV4 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
NEDD1Q8NHV4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.72■□□□□ 0.75
NEDD1Q8NHV4 PMS2P4-201ENST00000412466 1052 ntBASIC19.72■□□□□ 0.75
NEDD1Q8NHV4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.72■□□□□ 0.75
NEDD1Q8NHV4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NEDD1Q8NHV4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NEDD1Q8NHV4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.72■□□□□ 0.75
NEDD1Q8NHV4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.72■□□□□ 0.75
NEDD1Q8NHV4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.72■□□□□ 0.75
NEDD1Q8NHV4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
NEDD1Q8NHV4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.72■□□□□ 0.75
NEDD1Q8NHV4 AL161645.1-201ENST00000622716 1255 ntBASIC19.72■□□□□ 0.75
NEDD1Q8NHV4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEDD1Q8NHV4 PCDHB17P-201ENST00000539533 2393 ntBASIC19.72■□□□□ 0.75
NEDD1Q8NHV4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.72■□□□□ 0.75
NEDD1Q8NHV4 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEDD1Q8NHV4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
NEDD1Q8NHV4 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.72■□□□□ 0.75
NEDD1Q8NHV4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NEDD1Q8NHV4 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 KRT8P48-201ENST00000515599 1220 ntBASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 RARRES2P8-201ENST00000566335 367 ntBASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 AC006277.1-201ENST00000624348 1610 ntBASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 AC060834.1-201ENST00000443027 2032 ntBASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
NEDD1Q8NHV4 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEDD1Q8NHV4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
NEDD1Q8NHV4 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms