Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 AL513523.2-202ENST00000427283 2040 ntBASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 TSPY21P-201ENST00000433481 731 ntBASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 UNC93B8-201ENST00000511903 705 ntBASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 SLC7A5P2-201ENST00000553010 536 ntBASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 MPST-208ENST00000628507 698 ntTSL 5 BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 DZIP1-201ENST00000347108 7068 ntAPPRIS P4 TSL 5 BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 VAX1-201ENST00000277905 4494 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 AGGF1P2-201ENST00000426656 2106 ntBASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 EPHA5-206ENST00000622150 8421 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 AL805961.2-201ENST00000642139 4817 ntBASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 GAB2-201ENST00000340149 6052 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC9.35□□□□□ -0.91
SPTSSBQ8NFR3 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 NUDCD3-202ENST00000355451 8256 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 RDX-218ENST00000544551 4117 ntTSL 2 BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 HSD17B1P1-201ENST00000590052 955 ntBASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 TMEM56-201ENST00000370203 6822 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 EPHA5-201ENST00000273854 8266 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SPTSSBQ8NFR3 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms