Protein–RNA interactions for Protein: Q8NE62

CHDH, Choline dehydrogenase, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHDHQ8NE62 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.19■□□□□ 0.18
CHDHQ8NE62 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CHDHQ8NE62 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHDHQ8NE62 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHDHQ8NE62 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHDHQ8NE62 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHDHQ8NE62 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CHDHQ8NE62 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHDHQ8NE62 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHDHQ8NE62 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.19■□□□□ 0.18
CHDHQ8NE62 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.19■□□□□ 0.18
CHDHQ8NE62 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.19■□□□□ 0.18
CHDHQ8NE62 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CHDHQ8NE62 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.18■□□□□ 0.18
CHDHQ8NE62 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CHDHQ8NE62 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHDHQ8NE62 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHDHQ8NE62 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHDHQ8NE62 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHDHQ8NE62 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.18■□□□□ 0.18
CHDHQ8NE62 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHDHQ8NE62 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHDHQ8NE62 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.18■□□□□ 0.18
CHDHQ8NE62 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHDHQ8NE62 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHDHQ8NE62 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHDHQ8NE62 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.18■□□□□ 0.18
CHDHQ8NE62 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHDHQ8NE62 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHDHQ8NE62 AC046185.3-201ENST00000623228 1824 ntBASIC16.18■□□□□ 0.18
CHDHQ8NE62 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHDHQ8NE62 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHDHQ8NE62 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CHDHQ8NE62 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHDHQ8NE62 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CHDHQ8NE62 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.18■□□□□ 0.18
CHDHQ8NE62 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHDHQ8NE62 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.18■□□□□ 0.18
CHDHQ8NE62 LINC00265-3P-201ENST00000447588 903 ntBASIC16.18■□□□□ 0.18
CHDHQ8NE62 BNIP3P18-201ENST00000593976 575 ntBASIC16.18■□□□□ 0.18
CHDHQ8NE62 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.18■□□□□ 0.18
CHDHQ8NE62 IFNL4P1-201ENST00000607083 540 ntBASIC16.18■□□□□ 0.18
CHDHQ8NE62 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CHDHQ8NE62 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.18■□□□□ 0.18
CHDHQ8NE62 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.18■□□□□ 0.18
CHDHQ8NE62 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHDHQ8NE62 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHDHQ8NE62 NSUN5P1-202ENST00000421140 1535 ntBASIC16.18■□□□□ 0.18
CHDHQ8NE62 NSUN5P2-203ENST00000457352 1529 ntBASIC16.18■□□□□ 0.18
CHDHQ8NE62 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.18■□□□□ 0.18
CHDHQ8NE62 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.18■□□□□ 0.18
CHDHQ8NE62 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
CHDHQ8NE62 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHDHQ8NE62 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHDHQ8NE62 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHDHQ8NE62 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHDHQ8NE62 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CHDHQ8NE62 INTS4P1-201ENST00000438455 1935 ntBASIC16.17■□□□□ 0.18
CHDHQ8NE62 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
CHDHQ8NE62 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHDHQ8NE62 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.17■□□□□ 0.18
CHDHQ8NE62 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHDHQ8NE62 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CHDHQ8NE62 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHDHQ8NE62 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHDHQ8NE62 AL513477.1-201ENST00000602865 2407 ntBASIC16.17■□□□□ 0.18
CHDHQ8NE62 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHDHQ8NE62 AC007950.2-201ENST00000615045 2347 ntBASIC16.17■□□□□ 0.18
CHDHQ8NE62 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CHDHQ8NE62 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHDHQ8NE62 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHDHQ8NE62 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHDHQ8NE62 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.17■□□□□ 0.18
CHDHQ8NE62 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CHDHQ8NE62 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CHDHQ8NE62 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHDHQ8NE62 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHDHQ8NE62 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.17■□□□□ 0.18
CHDHQ8NE62 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHDHQ8NE62 SLC25A1P3-201ENST00000395415 828 ntBASIC16.17■□□□□ 0.18
CHDHQ8NE62 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHDHQ8NE62 MINOS1P3-201ENST00000457048 203 ntBASIC16.17■□□□□ 0.18
CHDHQ8NE62 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHDHQ8NE62 AL662844.1-201ENST00000546340 181 ntBASIC16.17■□□□□ 0.18
CHDHQ8NE62 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.17■□□□□ 0.18
CHDHQ8NE62 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.17■□□□□ 0.18
CHDHQ8NE62 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.17■□□□□ 0.18
CHDHQ8NE62 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.17■□□□□ 0.18
CHDHQ8NE62 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CHDHQ8NE62 AL121772.3-201ENST00000610840 674 ntBASIC16.17■□□□□ 0.18
CHDHQ8NE62 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.17■□□□□ 0.18
CHDHQ8NE62 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
CHDHQ8NE62 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CHDHQ8NE62 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHDHQ8NE62 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.17■□□□□ 0.18
CHDHQ8NE62 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.17■□□□□ 0.18
CHDHQ8NE62 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHDHQ8NE62 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHDHQ8NE62 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHDHQ8NE62 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms