Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRTM2Q8N967 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.93□□□□□ -0.18
LRTM2Q8N967 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LRTM2Q8N967 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.93□□□□□ -0.18
LRTM2Q8N967 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC13.93□□□□□ -0.18
LRTM2Q8N967 VPS72-207ENST00000640458 689 ntTSL 5 BASIC13.93□□□□□ -0.18
LRTM2Q8N967 AL031432.5-201ENST00000641059 760 ntBASIC13.93□□□□□ -0.18
LRTM2Q8N967 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LRTM2Q8N967 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
LRTM2Q8N967 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRTM2Q8N967 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LRTM2Q8N967 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.93□□□□□ -0.18
LRTM2Q8N967 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRTM2Q8N967 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.93□□□□□ -0.18
LRTM2Q8N967 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRTM2Q8N967 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRTM2Q8N967 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.93□□□□□ -0.18
LRTM2Q8N967 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRTM2Q8N967 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.93□□□□□ -0.18
LRTM2Q8N967 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LRTM2Q8N967 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRTM2Q8N967 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LRTM2Q8N967 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.93□□□□□ -0.18
LRTM2Q8N967 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LRTM2Q8N967 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRTM2Q8N967 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRTM2Q8N967 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.92□□□□□ -0.18
LRTM2Q8N967 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.92□□□□□ -0.18
LRTM2Q8N967 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LRTM2Q8N967 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRTM2Q8N967 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LRTM2Q8N967 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LRTM2Q8N967 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.92□□□□□ -0.18
LRTM2Q8N967 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRTM2Q8N967 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRTM2Q8N967 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRTM2Q8N967 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRTM2Q8N967 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.92□□□□□ -0.18
LRTM2Q8N967 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRTM2Q8N967 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.92□□□□□ -0.18
LRTM2Q8N967 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRTM2Q8N967 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRTM2Q8N967 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.92□□□□□ -0.18
LRTM2Q8N967 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRTM2Q8N967 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LRTM2Q8N967 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRTM2Q8N967 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.92□□□□□ -0.18
LRTM2Q8N967 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRTM2Q8N967 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRTM2Q8N967 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRTM2Q8N967 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.92□□□□□ -0.18
LRTM2Q8N967 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.92□□□□□ -0.18
LRTM2Q8N967 FAM220CP-201ENST00000395253 831 ntBASIC13.92□□□□□ -0.18
LRTM2Q8N967 STARP1-201ENST00000397973 869 ntBASIC13.92□□□□□ -0.18
LRTM2Q8N967 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC13.92□□□□□ -0.18
LRTM2Q8N967 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRTM2Q8N967 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LRTM2Q8N967 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
LRTM2Q8N967 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRTM2Q8N967 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC13.92□□□□□ -0.18
LRTM2Q8N967 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRTM2Q8N967 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC13.92□□□□□ -0.18
LRTM2Q8N967 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC13.92□□□□□ -0.18
LRTM2Q8N967 AL390719.2-201ENST00000606993 987 ntBASIC13.92□□□□□ -0.18
LRTM2Q8N967 SPEG-225ENST00000617028 815 ntTSL 5 BASIC13.92□□□□□ -0.18
LRTM2Q8N967 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.92□□□□□ -0.18
LRTM2Q8N967 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LRTM2Q8N967 AC002310.6-201ENST00000624451 1377 ntBASIC13.92□□□□□ -0.18
LRTM2Q8N967 AL021920.2-201ENST00000624828 1351 ntBASIC13.92□□□□□ -0.18
LRTM2Q8N967 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LRTM2Q8N967 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRTM2Q8N967 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRTM2Q8N967 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.92□□□□□ -0.18
LRTM2Q8N967 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LRTM2Q8N967 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
LRTM2Q8N967 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.92□□□□□ -0.18
LRTM2Q8N967 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRTM2Q8N967 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRTM2Q8N967 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
LRTM2Q8N967 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.91□□□□□ -0.18
LRTM2Q8N967 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.91□□□□□ -0.18
LRTM2Q8N967 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.91□□□□□ -0.18
LRTM2Q8N967 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRTM2Q8N967 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRTM2Q8N967 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRTM2Q8N967 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRTM2Q8N967 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.91□□□□□ -0.18
LRTM2Q8N967 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRTM2Q8N967 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.91□□□□□ -0.18
LRTM2Q8N967 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.91□□□□□ -0.18
LRTM2Q8N967 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.91□□□□□ -0.18
LRTM2Q8N967 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.91□□□□□ -0.18
LRTM2Q8N967 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LRTM2Q8N967 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRTM2Q8N967 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRTM2Q8N967 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRTM2Q8N967 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LRTM2Q8N967 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.91□□□□□ -0.18
LRTM2Q8N967 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LRTM2Q8N967 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms