Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 MRPL3P1-201ENST00000400109 1033 ntBASIC17.54■□□□□ 0.4
PAF1Q8N7H5 AL031284.1-201ENST00000419297 478 ntBASIC17.54■□□□□ 0.4
PAF1Q8N7H5 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 NCF1C-201ENST00000438382 1427 ntBASIC17.54■□□□□ 0.4
PAF1Q8N7H5 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.54■□□□□ 0.4
PAF1Q8N7H5 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 AC104692.2-201ENST00000603054 253 ntBASIC17.53■□□□□ 0.4
PAF1Q8N7H5 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PAF1Q8N7H5 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.52■□□□□ 0.4
PAF1Q8N7H5 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms