Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC33Q8N5R6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 SLC25A1P3-201ENST00000395415 828 ntBASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 SIGLEC16-201ENST00000599858 1437 ntBASIC17.89■□□□□ 0.45
CCDC33Q8N5R6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 AC009336.1-201ENST00000608941 1553 ntBASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 AL135999.2-201ENST00000622438 1686 ntBASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 MYCLP1-201ENST00000372451 1075 ntBASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 AC004832.2-201ENST00000426397 482 ntBASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 AP001160.2-201ENST00000596071 487 ntBASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 PGM5P2-202ENST00000637225 1043 ntBASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 AC134684.3-201ENST00000641758 218 ntBASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 AC084018.2-201ENST00000613093 2607 ntBASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CCDC33Q8N5R6 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC33Q8N5R6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms