Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATPAF2Q8N5M1 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATPAF2Q8N5M1 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ATPAF2Q8N5M1 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ATPAF2Q8N5M1 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ATPAF2Q8N5M1 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 AC105020.1-201ENST00000435356 2205 ntBASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 PCDHA12-202ENST00000613593 2588 ntBASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 AL021920.2-201ENST00000624828 1351 ntBASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 PAWRP1-201ENST00000451083 565 ntBASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 AC009078.2-202ENST00000463353 338 ntBASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 AC093909.1-201ENST00000504731 1122 ntBASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 AP001005.1-201ENST00000571755 1248 ntBASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 SLC25A6P4-201ENST00000586535 553 ntBASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 AC005593.1-201ENST00000624894 515 ntBASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 PGM5P2-202ENST00000637225 1043 ntBASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.45■□□□□ 0.38
ATPAF2Q8N5M1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 AC092910.1-201ENST00000482027 1129 ntBASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 AL049840.3-201ENST00000602669 611 ntBASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.44■□□□□ 0.38
ATPAF2Q8N5M1 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
ATPAF2Q8N5M1 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATPAF2Q8N5M1 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
ATPAF2Q8N5M1 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
ATPAF2Q8N5M1 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATPAF2Q8N5M1 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATPAF2Q8N5M1 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
ATPAF2Q8N5M1 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATPAF2Q8N5M1 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.43■□□□□ 0.38
ATPAF2Q8N5M1 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATPAF2Q8N5M1 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ATPAF2Q8N5M1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ATPAF2Q8N5M1 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.43■□□□□ 0.38
ATPAF2Q8N5M1 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
ATPAF2Q8N5M1 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms