Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
LCA10Q71F78 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
LCA10Q71F78 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC9.25□□□□□ -0.93
LCA10Q71F78 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
LCA10Q71F78 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LCA10Q71F78 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC9.25□□□□□ -0.93
LCA10Q71F78 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
LCA10Q71F78 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
LCA10Q71F78 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
LCA10Q71F78 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
LCA10Q71F78 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
LCA10Q71F78 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
LCA10Q71F78 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
LCA10Q71F78 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
LCA10Q71F78 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
LCA10Q71F78 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LCA10Q71F78 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
LCA10Q71F78 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LCA10Q71F78 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC9.24□□□□□ -0.93
LCA10Q71F78 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
LCA10Q71F78 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
LCA10Q71F78 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
LCA10Q71F78 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC9.24□□□□□ -0.93
LCA10Q71F78 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LCA10Q71F78 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LCA10Q71F78 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
LCA10Q71F78 AC008556.1-201ENST00000610908 2040 ntBASIC9.24□□□□□ -0.93
LCA10Q71F78 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC9.24□□□□□ -0.93
LCA10Q71F78 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC9.24□□□□□ -0.93
LCA10Q71F78 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LCA10Q71F78 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC9.24□□□□□ -0.93
LCA10Q71F78 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC9.24□□□□□ -0.93
LCA10Q71F78 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LCA10Q71F78 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC9.24□□□□□ -0.93
LCA10Q71F78 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC9.24□□□□□ -0.93
LCA10Q71F78 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC9.24□□□□□ -0.93
LCA10Q71F78 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LCA10Q71F78 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LCA10Q71F78 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC9.24□□□□□ -0.93
LCA10Q71F78 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
LCA10Q71F78 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC9.24□□□□□ -0.93
LCA10Q71F78 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC9.24□□□□□ -0.93
LCA10Q71F78 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
LCA10Q71F78 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LCA10Q71F78 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LCA10Q71F78 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC9.24□□□□□ -0.93
LCA10Q71F78 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC9.24□□□□□ -0.93
LCA10Q71F78 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
LCA10Q71F78 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
LCA10Q71F78 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LCA10Q71F78 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
LCA10Q71F78 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC9.24□□□□□ -0.93
LCA10Q71F78 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
LCA10Q71F78 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC9.24□□□□□ -0.93
LCA10Q71F78 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC9.24□□□□□ -0.93
LCA10Q71F78 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LCA10Q71F78 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC9.24□□□□□ -0.93
LCA10Q71F78 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC9.24□□□□□ -0.93
LCA10Q71F78 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC9.24□□□□□ -0.93
LCA10Q71F78 AC068587.9-201ENST00000641814 219 ntBASIC9.24□□□□□ -0.93
LCA10Q71F78 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC9.24□□□□□ -0.93
LCA10Q71F78 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
LCA10Q71F78 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC9.24□□□□□ -0.93
LCA10Q71F78 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
LCA10Q71F78 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
LCA10Q71F78 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC9.24□□□□□ -0.93
LCA10Q71F78 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC9.24□□□□□ -0.93
LCA10Q71F78 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LCA10Q71F78 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LCA10Q71F78 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
LCA10Q71F78 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LCA10Q71F78 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC9.24□□□□□ -0.93
LCA10Q71F78 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LCA10Q71F78 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC9.24□□□□□ -0.93
LCA10Q71F78 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC9.24□□□□□ -0.93
LCA10Q71F78 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
LCA10Q71F78 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC9.24□□□□□ -0.93
LCA10Q71F78 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC9.24□□□□□ -0.93
LCA10Q71F78 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LCA10Q71F78 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC9.24□□□□□ -0.93
LCA10Q71F78 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC9.24□□□□□ -0.93
LCA10Q71F78 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LCA10Q71F78 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LCA10Q71F78 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
LCA10Q71F78 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC9.24□□□□□ -0.93
LCA10Q71F78 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
LCA10Q71F78 AC004817.3-201ENST00000602957 2129 ntBASIC9.23□□□□□ -0.93
LCA10Q71F78 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
LCA10Q71F78 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC9.23□□□□□ -0.93
LCA10Q71F78 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC9.23□□□□□ -0.93
LCA10Q71F78 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC9.23□□□□□ -0.93
LCA10Q71F78 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC9.23□□□□□ -0.93
LCA10Q71F78 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
LCA10Q71F78 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC9.23□□□□□ -0.93
LCA10Q71F78 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
LCA10Q71F78 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms