Protein–RNA interactions for Protein: Q6P2S7

TTC41P, Putative tetratricopeptide repeat protein 41, humanhuman

Predictions only

Length 1,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC41PQ6P2S7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TTC41PQ6P2S7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TTC41PQ6P2S7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.63■□□□□ 0.89
TTC41PQ6P2S7 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TTC41PQ6P2S7 PMS2P1-201ENST00000431037 1228 ntBASIC20.63■□□□□ 0.89
TTC41PQ6P2S7 VN2R19P-201ENST00000442399 1052 ntBASIC20.63■□□□□ 0.89
TTC41PQ6P2S7 FAM185BP-201ENST00000443595 716 ntBASIC20.63■□□□□ 0.89
TTC41PQ6P2S7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.63■□□□□ 0.89
TTC41PQ6P2S7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.63■□□□□ 0.89
TTC41PQ6P2S7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.63■□□□□ 0.89
TTC41PQ6P2S7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TTC41PQ6P2S7 AC034105.1-201ENST00000563488 319 ntBASIC20.63■□□□□ 0.89
TTC41PQ6P2S7 ACTL9-202ENST00000612068 1252 ntBASIC20.63■□□□□ 0.89
TTC41PQ6P2S7 BX640515.1-201ENST00000617215 977 ntBASIC20.63■□□□□ 0.89
TTC41PQ6P2S7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TTC41PQ6P2S7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.63■□□□□ 0.89
TTC41PQ6P2S7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.63■□□□□ 0.89
TTC41PQ6P2S7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TTC41PQ6P2S7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TTC41PQ6P2S7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TTC41PQ6P2S7 AC131009.4-201ENST00000624048 1740 ntBASIC20.63■□□□□ 0.89
TTC41PQ6P2S7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.63■□□□□ 0.89
TTC41PQ6P2S7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.63■□□□□ 0.89
TTC41PQ6P2S7 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 AL603756.1-201ENST00000606511 2163 ntBASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 IGLL3P-201ENST00000412472 434 ntBASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
TTC41PQ6P2S7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TTC41PQ6P2S7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TTC41PQ6P2S7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TTC41PQ6P2S7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TTC41PQ6P2S7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TTC41PQ6P2S7 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TTC41PQ6P2S7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.61■□□□□ 0.89
TTC41PQ6P2S7 CRYGEP-201ENST00000412192 528 ntBASIC20.61■□□□□ 0.89
TTC41PQ6P2S7 HCG4B-203ENST00000450128 991 ntBASIC20.61■□□□□ 0.89
TTC41PQ6P2S7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.61■□□□□ 0.89
TTC41PQ6P2S7 CXCL1P1-201ENST00000502804 216 ntBASIC20.61■□□□□ 0.89
TTC41PQ6P2S7 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.61■□□□□ 0.89
TTC41PQ6P2S7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.61■□□□□ 0.89
TTC41PQ6P2S7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.61■□□□□ 0.89
TTC41PQ6P2S7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.61■□□□□ 0.89
TTC41PQ6P2S7 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.61■□□□□ 0.89
TTC41PQ6P2S7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TTC41PQ6P2S7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TTC41PQ6P2S7 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TTC41PQ6P2S7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC20.61■□□□□ 0.89
TTC41PQ6P2S7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
TTC41PQ6P2S7 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.61■□□□□ 0.89
TTC41PQ6P2S7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC20.61■□□□□ 0.89
TTC41PQ6P2S7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TTC41PQ6P2S7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TTC41PQ6P2S7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC20.6■□□□□ 0.89
TTC41PQ6P2S7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TTC41PQ6P2S7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC20.6■□□□□ 0.89
TTC41PQ6P2S7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC20.6■□□□□ 0.89
TTC41PQ6P2S7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TTC41PQ6P2S7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TTC41PQ6P2S7 AC104109.2-201ENST00000602919 1418 ntBASIC20.6■□□□□ 0.89
TTC41PQ6P2S7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TTC41PQ6P2S7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TTC41PQ6P2S7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.6■□□□□ 0.89
TTC41PQ6P2S7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
TTC41PQ6P2S7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TTC41PQ6P2S7 AL590627.1-203ENST00000421194 1026 ntBASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms