Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 AC002558.1-201ENST00000488906 803 ntBASIC16.09■□□□□ 0.17
LPCAT4Q643R3 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.09■□□□□ 0.17
LPCAT4Q643R3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 FRMD8P1-201ENST00000440433 1524 ntBASIC16.09■□□□□ 0.17
LPCAT4Q643R3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LPCAT4Q643R3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LPCAT4Q643R3 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.08■□□□□ 0.17
LPCAT4Q643R3 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
LPCAT4Q643R3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
LPCAT4Q643R3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
LPCAT4Q643R3 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
LPCAT4Q643R3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LPCAT4Q643R3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
LPCAT4Q643R3 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
LPCAT4Q643R3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT4Q643R3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT4Q643R3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.08■□□□□ 0.16
LPCAT4Q643R3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT4Q643R3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT4Q643R3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT4Q643R3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT4Q643R3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.08■□□□□ 0.16
LPCAT4Q643R3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT4Q643R3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
LPCAT4Q643R3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
LPCAT4Q643R3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT4Q643R3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT4Q643R3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.08■□□□□ 0.16
LPCAT4Q643R3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.08■□□□□ 0.16
LPCAT4Q643R3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT4Q643R3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.08■□□□□ 0.16
LPCAT4Q643R3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT4Q643R3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT4Q643R3 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT4Q643R3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.08■□□□□ 0.16
LPCAT4Q643R3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
LPCAT4Q643R3 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT4Q643R3 AL009178.2-201ENST00000597278 2719 ntBASIC16.08■□□□□ 0.16
LPCAT4Q643R3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
LPCAT4Q643R3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.08■□□□□ 0.16
LPCAT4Q643R3 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT4Q643R3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
LPCAT4Q643R3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.08■□□□□ 0.16
LPCAT4Q643R3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.08■□□□□ 0.16
LPCAT4Q643R3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT4Q643R3 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
LPCAT4Q643R3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 CRYGFP-201ENST00000418459 633 ntBASIC16.07■□□□□ 0.16
LPCAT4Q643R3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
LPCAT4Q643R3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LPCAT4Q643R3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms