Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB11AP62491 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB11AP62491 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC13.91□□□□□ -0.18
RAB11AP62491 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC13.91□□□□□ -0.18
RAB11AP62491 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
RAB11AP62491 TBC1D3P5-201ENST00000579401 1545 ntBASIC13.91□□□□□ -0.18
RAB11AP62491 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB11AP62491 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RAB11AP62491 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB11AP62491 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RAB11AP62491 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB11AP62491 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB11AP62491 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB11AP62491 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB11AP62491 CRAT-202ENST00000393384 973 ntTSL 2 BASIC13.91□□□□□ -0.18
RAB11AP62491 FAM8A6P-201ENST00000407496 1135 ntBASIC13.91□□□□□ -0.18
RAB11AP62491 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB11AP62491 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC13.91□□□□□ -0.18
RAB11AP62491 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC13.91□□□□□ -0.18
RAB11AP62491 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.91□□□□□ -0.18
RAB11AP62491 FAM87A-204ENST00000613235 858 ntBASIC13.91□□□□□ -0.18
RAB11AP62491 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC13.91□□□□□ -0.18
RAB11AP62491 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB11AP62491 AC046185.3-201ENST00000623228 1824 ntBASIC13.91□□□□□ -0.18
RAB11AP62491 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.91□□□□□ -0.18
RAB11AP62491 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB11AP62491 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB11AP62491 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB11AP62491 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.91□□□□□ -0.18
RAB11AP62491 AL513523.2-202ENST00000427283 2040 ntBASIC13.91□□□□□ -0.18
RAB11AP62491 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RAB11AP62491 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC13.91□□□□□ -0.18
RAB11AP62491 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB11AP62491 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC13.91□□□□□ -0.18
RAB11AP62491 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RAB11AP62491 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB11AP62491 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RAB11AP62491 AL136379.1-201ENST00000623471 2642 ntBASIC13.91□□□□□ -0.18
RAB11AP62491 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RAB11AP62491 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB11AP62491 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RAB11AP62491 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RAB11AP62491 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.91□□□□□ -0.18
RAB11AP62491 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB11AP62491 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB11AP62491 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB11AP62491 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.9□□□□□ -0.18
RAB11AP62491 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.9□□□□□ -0.18
RAB11AP62491 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC13.9□□□□□ -0.18
RAB11AP62491 AL391807.1-203ENST00000604392 2365 ntBASIC13.9□□□□□ -0.18
RAB11AP62491 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB11AP62491 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
RAB11AP62491 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.9□□□□□ -0.18
RAB11AP62491 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.9□□□□□ -0.18
RAB11AP62491 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.9□□□□□ -0.18
RAB11AP62491 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB11AP62491 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB11AP62491 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB11AP62491 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB11AP62491 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RAB11AP62491 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
RAB11AP62491 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB11AP62491 MMP23A-201ENST00000234610 1017 ntBASIC13.9□□□□□ -0.18
RAB11AP62491 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB11AP62491 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB11AP62491 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB11AP62491 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RAB11AP62491 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB11AP62491 IGHV3-52-201ENST00000519770 353 ntBASIC13.9□□□□□ -0.18
RAB11AP62491 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC13.9□□□□□ -0.18
RAB11AP62491 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
RAB11AP62491 TK1-204ENST00000590430 683 ntTSL 3 BASIC13.9□□□□□ -0.18
RAB11AP62491 TMED1-207ENST00000591695 809 ntTSL 5 BASIC13.9□□□□□ -0.18
RAB11AP62491 AC140113.3-201ENST00000605663 199 ntBASIC13.9□□□□□ -0.18
RAB11AP62491 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC13.9□□□□□ -0.18
RAB11AP62491 AC010947.1-201ENST00000623454 693 ntBASIC13.9□□□□□ -0.18
RAB11AP62491 AP006294.2-201ENST00000641667 209 ntBASIC13.9□□□□□ -0.18
RAB11AP62491 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB11AP62491 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB11AP62491 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB11AP62491 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB11AP62491 CYP2D8P-201ENST00000433633 1490 ntBASIC13.9□□□□□ -0.18
RAB11AP62491 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB11AP62491 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RAB11AP62491 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC13.9□□□□□ -0.18
RAB11AP62491 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB11AP62491 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.9□□□□□ -0.18
RAB11AP62491 CYP2T1P-202ENST00000641596 2535 ntBASIC13.9□□□□□ -0.18
RAB11AP62491 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB11AP62491 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.9□□□□□ -0.18
RAB11AP62491 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB11AP62491 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB11AP62491 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB11AP62491 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB11AP62491 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
RAB11AP62491 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC13.9□□□□□ -0.18
RAB11AP62491 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
RAB11AP62491 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
RAB11AP62491 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
RAB11AP62491 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms